Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq204124 123 2e-23 >seq204124 Length=22413 Score = 123 bits (136), Expect = 2e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 ||||||| | || || || |||||||| ||| || | ||||| || || |||||| | || Sbjct 6541 ACGTCTCGTCGCTTTCGCCGCTGTTGAGGGCATCTTCTTTTCCGGATCTTTTGCGTCTAT 6600 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 |||||| ||||||| ||| | |||||||| | | ||||||||||||||||| || Sbjct 6601 TTTCTGGATGAAGAAGCGTGGTTTGATGCCAGGTCTTACCTTTTCCAACGAGTTGATCAG 6660 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA 22907 ||| |||||||| | ||| || ||||||||| |||| || || || Sbjct 6661 CCGGGACGAAGGCATGCACACGGATTTTGCTTGTCTGCTTTTCAGCCA 6708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355345708680724