Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq204124 120 3e-22 >seq204124 Length=22413 Score = 120 bits (132), Expect = 3e-22 Identities = 371/569 (65%), Gaps = 9/569 (2%) Strand=Plus/Minus Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710 |||| | ||| |||||||| || | ||| || || | || || | ||||| ||| Sbjct 6702 AAAAGCAGACAAGCAAAATCCGTGTGCATGCCTTCGTCCCGGCTGATCAACTCGTTGGAA 6643 Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770 || || | ||||||||||| || || || || | ||| || || | || || |||||| Sbjct 6642 AAGGTAAGACCTGGCATCAAACCACGCTTCTTCATCCAGAAAATAGACGCAAAAGATCCG 6583 Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830 |||||||| || |||||||| || || || || | || |||||||| || | | | | Sbjct 6582 GAAAAGAAGATGCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCGAATGTCGAGTCT 6523 Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890 |||| |||||||| || ||||| || | || ||| || | || || ||| Sbjct 6522 TTGTCGGATATCCAATTGAGTGCCCAGTCGGCCTTGCGTTTGATGCATGGGATGGTCTCG 6463 Query 13891 ATTGCATTGAATAAATGTT--CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 13948 | || | || | | | | ||| | || |||| ||||| ||||| || || Sbjct 6462 ACAGCGTCAAAGAGGTACTCGCGTTCGGCTGGGTCCTTG--ATGTACGTATCGATGAG-G 6406 Query 13949 AGCTA-TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTA 14007 ||| | || | || || || |||||||| || || || || ||||| ||||| | Sbjct 6405 AGCGAGTATGTCTCCGAATGGATGTTTTCCATCATGATTTGGAAGCCATAGAAACACCGT 6346 Query 14008 GCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCA 14067 || || | ||| || || | || | || ||| || || || ||||| || Sbjct 6345 GCCTCGGCAGCTTGAACTTCGTTTGAGAAGCGCTCGACCAGATTCTCGTTGACAATCCCG 6286 Query 14068 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT 14127 ||| ||| || ||||| || || | || |||||||| | || | | ||||||| Sbjct 6285 TCAGAAGCGGCGAAAAAGGCTAAAACGTGAGAAATAAAGTGGCGTTCGTTGTCGTTGAGT 6226 Query 14128 ---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14184 ||| |||| ||| | ||||| || | || | ||| || | |||||||| | Sbjct 6225 TTGTTTGTCCAGTCGTGAAGGTCCTTCGACAAGTCCATTTCCTCTGCAGTCCAAAACGAA 6166 Query 14185 GCGACAGCTTTTTTATACATTACCCATAT 14213 || ||||||| |||||||| |||||| Sbjct 6165 GCTTCAGCTTTCTTATACATCTGCCATAT 6137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477365359521120