Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq204495 105 5e-18 >seq204495 Length=136544 Score = 105 bits (116), Expect = 5e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971 |||| |||||| || | |||||| ||||| | || ||| |||| || | ||||||||| Sbjct 14703 AGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTTCGTCCGTCCTCGAGTTGTTTGCC 14762 Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTT 43031 |||||| ||||| || || ||||||| || | ||||| || || |||| |||| Sbjct 14763 GGCAAAGATCAAGCGTTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTTTGCTTT 14822 Query 43032 GACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGT 43091 || || | | || ||| | ||||| || | ||| || || || ||||| || || Sbjct 14823 CACGTTGTCGATAGTATCGGATGATTCGACCTCCAACGTGATGGTCTTCCCGGTGAGCGT 14882 Query 43092 TTTCACAAAAATTTGCAT 43109 ||||| ||||||||||| Sbjct 14883 CTTCACGAAAATTTGCAT 14900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380419058677464