Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq204495 122 2e-22 seq201019 102 2e-16 seq203452 86.0 1e-11 >seq204495 Length=136544 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| ||||| || ||||||| ||||| || |||||||| || Sbjct 14704 GTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTTCGTCCGTCCTCGAGTTGTTTGCCG 14763 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | || ||||| ||||| || ||||| || || || ||||||||||| Sbjct 14764 GCAAAGATCAAGCGTTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTTTGCTTTC 14823 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||| | ||| ||||| | || || ||||| || || || || Sbjct 14824 ACGTTGTCGATAGTATCGGATGATTCGACCTCCAACGTGATGGTCTTCCCGGTGAGCGTC 14883 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 14884 TTCACGAAAATTTGCAT 14900 >seq201019 Length=96896 Score = 102 bits (112), Expect = 2e-16 Identities = 143/200 (72%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 269087 GAATGGGCTCTGAAATGGATAAACGATA---GCGCGCCTTACGGAGAAAGGTTAGTTGCT 269143 || ||||| |||| |||||| ||| | || | ||| | ||| | | || || Sbjct 29292 GACTGGGCCTTGAAGTGGATATCCGACAAAAGCTCCACTTTTGCAGAGCGTCTGGTCGCG 29351 Query 269144 TTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAG 269203 ||||||||||| ||||| || ||||| ||||| || ||||| | ||||||||| |||| Sbjct 29352 TTTGCCGCTGTTGAAGGGATTTTCTTCTCGGGCTCGTTTGCGTCCATCTTTTGGATGAAA 29411 Query 269204 AAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGT 269263 || ||||||| ||||| || | |||||||| || || | || ||| | || || || Sbjct 29412 AAGCGAGGCCTGATGCCCGGCCTTACTTTCTCCAATGAGCTCATCAGCCGCGATGAGGGG 29471 Query 269264 TTACACTGCGACTTCGCTTG 269283 | ||| |||||| ||||| Sbjct 29472 ATGCACACCGACTTTGCTTG 29491 >seq203452 Length=5053 Score = 86.0 bits (94), Expect = 1e-11 Identities = 102/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||| || |||||||| || || ||||| || || ||| || ||| | || |||||| Sbjct 659 GTAGCCTCCTTCTGAATGTTGTAATCAGAGAGCGTCTTACTGTTTTCATGCTGCTTTCCA 718 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| ||| |||| || || || ||||| || || ||||| ||||| Sbjct 719 GCAAAGATAAGGCGCTGCTGACCAGG-GGCATGCCGTCTTTGTCTTGGATCTTCGCTTTG 777 Query 104483 ACATTTTCTACGGTATC 104499 ||||| || | ||| || Sbjct 778 ACATTGTCGATGGTGTC 794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1148381438267664