Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq204001 91.5 8e-14 seq204165 89.7 3e-13 seq201863 89.7 3e-13 seq201133 89.7 3e-13 >seq204001 Length=43203 Score = 91.5 bits (100), Expect = 8e-14 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 36136 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 36195 Query 11528 CCGTCGA 11534 |||| || Sbjct 36196 CCGTTGA 36202 >seq204165 Length=62645 Score = 89.7 bits (98), Expect = 3e-13 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 11447 AAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCT 11506 ||| ||||| |||| | | |||||||||| |||||||||||||||||||||||||| Sbjct 61079 AAAACAAAT-GGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCT 61021 Query 11507 CTRACCAACTGAGCTAATGGGCC 11529 || ||||||||||||| | |||| Sbjct 61020 CTAACCAACTGAGCTAGTCGGCC 60998 >seq201863 Length=9598 Score = 89.7 bits (98), Expect = 3e-13 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||| ||||| | | |||||||||| |||||||||||||||||||||||| Sbjct 1566 AAAAAACAA--TGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACG 1623 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||| | |||| Sbjct 1624 CTCTAACCAACTGAGCTAGTCGGCC 1648 >seq201133 Length=2023 Score = 89.7 bits (98), Expect = 3e-13 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||| ||||| | | |||||||||| |||||||||||||||||||||||| Sbjct 458 AAAAAACAA--TGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACG 401 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||| | |||| Sbjct 400 CTCTAACCAACTGAGCTAGTCGGCC 376 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260839448546608