Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq204002 113 7e-21 seq203308 113 7e-21 seq203307 113 7e-21 seq202516 96.9 5e-16 seq204062 82.4 1e-11 >seq204002 Length=19121 Score = 113 bits (124), Expect = 7e-21 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 || || |||||||| || |||||||||||||| |||||| ||||||| | | || ||| Sbjct 15411 GCCATTCGTCGTCTCGCCCGTCGTGGTGGAGTGAAGCGTATCTCTGGTCTCATTTACGAA 15352 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| ||||| ||| | ||||||||||| ||| ||| |||| ||| || || ||| Sbjct 15351 GAGACTCGTGGTGTCCTCAAGATCTTCCTTGAGAACGTCATCCGTGACTCTGTCACCTAC 15292 Query 16607 ACCGAGCACGCTAAACG 16623 |||||||| ||||| || Sbjct 15291 ACCGAGCATGCTAAGCG 15275 >seq203308 Length=7287 Score = 113 bits (124), Expect = 7e-21 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 || || |||||||| || |||||||||||||| |||||| ||||||| | | || ||| Sbjct 2716 GCCATTCGTCGTCTCGCCCGTCGTGGTGGAGTGAAGCGTATCTCTGGTCTCATTTACGAA 2657 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| ||||| ||| | ||||||||||| ||| ||| |||| ||| || || ||| Sbjct 2656 GAGACTCGTGGTGTCCTCAAGATCTTCCTTGAGAACGTCATCCGTGACTCTGTCACCTAC 2597 Query 16607 ACCGAGCACGCTAAACG 16623 |||||||| ||||| || Sbjct 2596 ACCGAGCATGCTAAGCG 2580 >seq203307 Length=7275 Score = 113 bits (124), Expect = 7e-21 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 || || |||||||| || |||||||||||||| |||||| ||||||| | | || ||| Sbjct 2716 GCCATTCGTCGTCTCGCCCGTCGTGGTGGAGTGAAGCGTATCTCTGGTCTCATTTACGAA 2657 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| ||||| ||| | ||||||||||| ||| ||| |||| ||| || || ||| Sbjct 2656 GAGACTCGTGGTGTCCTCAAGATCTTCCTTGAGAACGTCATCCGTGACTCTGTCACCTAC 2597 Query 16607 ACCGAGCACGCTAAACG 16623 |||||||| ||||| || Sbjct 2596 ACCGAGCATGCTAAGCG 2580 >seq202516 Length=16672 Score = 96.9 bits (106), Expect = 5e-16 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| || || || ||||| ||||| |||||||||||||| ||||| ||| |||| Sbjct 10271 AGGTATCACAAAACCTGCCATCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAACGTATCTC 10212 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 ||| | |||| ||||||| ||||| ||| | ||||||||| Sbjct 10211 TGGCCTAATCTACGAAGAGACTCGTGGTGTACTCAAGATCTTC 10169 >seq204062 Length=33614 Score = 82.4 bits (90), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| || || ||||| |||||||| || || |||||||| ||||| ||| | || Sbjct 10682 AGGTATCACAAAACCCGCTATTCGTCGTCTCGCACGCCGTGGTGGTGTCAAACGTATTTC 10623 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || | ||||||| |||| || | ||| |||||||||||| Sbjct 10622 CGGGCTCATCTATGAGGAGACCCGAGGTGTATTGAAGATCTTC 10580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78888216904044