Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq202811 98.7 2e-15 >seq202811 Length=6703 Score = 98.7 bits (108), Expect = 2e-15 Identities = 291/446 (65%), Gaps = 2/446 (0%) Strand=Plus/Plus Query 193647 GAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTAT 193706 |||||||| || |||||||| ||| ||||| ||||| ||||| || ||| | || || Sbjct 344 GAGATCTACAACCTTGGTGCGCAATCGCATGTCAAAGTATCCTTCGAAATGGCCGAATAC 403 Query 193707 ACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGA 193766 || |||| |||| | | || || || | | || || || | |||| | ||| Sbjct 404 ACAGGCGATGTGGATGGTCTTGGTACCCTCCGTCTCCTCGACGCCATCCGTACCTGTGGA 463 Query 193767 ATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTA 193826 | || ||| | ||| | |||| ||||| ||||| || || || || || | Sbjct 464 CTCGAAAAACACGTTAGGTTCTACCAGGCGTCTACGTCTGAGCTTTACGGCAAGGTCGTG 523 Query 193827 GGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAG 193886 | || || | | || || || || ||| | || ||||| || ||||| |||||| Sbjct 524 GAGACCCCGCAAAGCGAGACGACGCCGTTTTACCCGCGCTCGCCGTATGGATGCGCAAAG 583 Query 193887 TTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCT 193946 ||||||| |||||||| | ||| ||| | ||| | ||||| | | || || | Sbjct 584 TTGTATGCGTATTGGATTGTGGTGAACTATAGGGAGGCGTATGGGATGTATGCGTGTAAT 643 Query 193947 GGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATT 194006 || ||| | |||||||| || ||| || ||||| ||| ||||| || | ||||| Sbjct 644 GGGATTTTGTTCAATCATGAGAGTCCGAGGAGAGGAAGGACGTTTGTGACGAGGAAGATC 703 Query 194007 ACACAAGGTTTATCTAAGATCTCTGTTGGATTA-CAGAAGATTCTTTATCTTGGTAATCT 194065 | || | | | || || ||||| | || | | | |||||||| ||| | Sbjct 704 TCGAGAGCGGCAGCGGATATTTC-GTTGGGCAAGCAATCGTGTTTGTATCTTGGAAATAT 762 Query 194066 TAATGCTAAGAGGGATTGGGGACACG 194091 | |||| || | ||||||||||||| Sbjct 763 TGATGCCCAGCGTGATTGGGGACACG 788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 805490806264480