Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08]
204,508 sequences; 46,746,859 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq204124 127 2e-24
>seq204124
Length=22413
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531
|| ||| |||||||| |||| ||||| |||| || || || || || ||||| ||
Sbjct 6697 CAGACAAGCAAAATCCGTGTGCATGCCTTCGTCCCGGCTGATCAACTCGTTGGAAAAGGT 6638
Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591
| ||| ||||| || || | ||| || | ||| || || |||||||| | ||| |||||
Sbjct 6637 AAGACCTGGCATCAAACCACGCTTCTTCATCCAGAAAATAGACGCAAAAGATCCGGAAAA 6578
Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651
||| ||||||||||| || || || || || | ||||| ||| |||| || ||||| ||
Sbjct 6577 GAAGATGCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCGAATGTCGAGTCTTTGTC 6518
Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTT 21681
||||||| || |||||| | |||||
Sbjct 6517 GGATATCCAATTGAGTGCCCAGTCGGCCTT 6488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530541075389920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |