Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq203715 100 7e-16 >seq203715 Length=28578 Score = 100 bits (110), Expect = 7e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436 |||||| ||| | ||||||| |||| | ||||| | ||||| || ||||| || Sbjct 23540 CAATCTGAACAGGATTATCGATGTGAATCACTATCCCGTCCCTGAGGCTCGCCGTTCAAA 23599 Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496 ||||| || |||||||| || ||||||| || || || ||||| ||||||| || Sbjct 23600 CATGCGCCACCGCCCGATCGGCGTTGGTGTGCAAGGTCTTGCTGATACTTTTATGGCACT 23659 Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556 | | ||| |||| |||||||||| ||| | ||| || | ||||||||||||| || Sbjct 23660 CCACATGCCATTCGATTCGCCTGCCGCCAAAGCTCTCAACATCCAGATCTTTGAAACCAT 23719 Query 364557 GTA 364559 || Sbjct 23720 CTA 23722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1299938476325256