Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq204496 107 2e-18 seq204495 96.9 3e-15 seq201019 95.1 1e-14 >seq204496 Length=81202 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | |||||||||||||||||||| || |||||| Sbjct 37325 CCACCACGGAGACGAAGCACCAAATGAAGAGTCGACTCCTTTTGAATGTTATAGTCGCTC 37384 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| || |||||||| ||| |||| | |||||| ||||| || ||| Sbjct 37385 AAAGTGCGACCATCCTCCAGTTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGTGGG 37444 Query 131128 AT 131129 || Sbjct 37445 AT 37446 >seq204495 Length=136544 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| ||| || || | ||| | ||||||||||||||| ||||| ||||| Sbjct 15184 GCCTCCACGCAGACGAAGGACGAGATGGAGGGTCGACTCCTTTTGGATGTTATAATCCGA 15243 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| || ||||| || ||| |||| ||||| || |||||||| || Sbjct 15244 TAAGGTGCGACCGTCCTCAAGTTGCTTCCCGGCGAAGATCAAACGTTGTTGGTCCGGGGG 15303 Query 131127 GAT 131129 ||| Sbjct 15304 GAT 15306 >seq201019 Length=96896 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 46108 GACTGGGCGATGAAGTGGAT---CAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTG 46164 |||||||| |||||||||| | ||| ||| || ||||| || |||||| |||| Sbjct 29292 GACTGGGCCTTGAAGTGGATATCCGACAAAAGCTCC---ACTTTTGCAGAGCGTCTGGTC 29348 Query 46165 GCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATC 46224 || ||||| ||| || || | || || || ||| ||||| ||||||||| || Sbjct 29349 GCGTTTGCCGCTGTTGAAGGGATTTTCTTCTCGGGCTCGTTTGCGTCCATCTTTTGGATG 29408 Query 46225 AAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284 |||| ||| | ||||||||||| || || ||| ||||| || ||||| ||| Sbjct 29409 AAAAAGCGAGGCCTGATGCCCGGCCTTACTTTCTCCAATGAGCTCATCAGCCGCGATGAG 29468 Query 46285 GGCCTGCATACGGACTTTGCGTGTCTC 46311 || |||| || |||||||| || ||| Sbjct 29469 GGGATGCACACCGACTTTGCTTGCCTC 29495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470806170078720