Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq204495 86.0 5e-12 >seq204495 Length=136544 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || || |||||||||| | ||| ||||||| | |||| Sbjct 14698 TGAAGAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTTCGTCCGTCCTCGAGTTGT 14757 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || | || || || || ||| | ||| || ||||| || ||| Sbjct 14758 TTGCCGGCAAAGATCAAGCGTTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTTT 14817 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| ||||| | | | | ||| ||| | || |||| |||||||| || |||| Sbjct 14818 GCT--TTCACGTTGTCGATAGTATCGGATGATTCGACCTCCAACGTGATGGTCTTCCCGG 14875 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | ||||| || || ||||| ||||| Sbjct 14876 TGAGCGTCTTCACGAAAATTTGCAT 14900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404078341958920