Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq201019 152 6e-32 seq204124 147 3e-30 >seq201019 Length=96896 Score = 152 bits (168), Expect = 6e-32 Identities = 372/559 (67%), Gaps = 10/559 (2%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| | ||||| || | || || | || ||||| || || || Sbjct 29491 CAAGCAAAGTCGGTGTGCATCCCCTCATCGCGGCTGATGAGCTCATTGGAGAAAGTAAGG 29432 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| ||||| |||||||| | |||||| ||||||||||| || || || |||||| Sbjct 29431 CCGGGCATCAGGCCTCGCTTTTTCATCCAAAAGATGGACGCAAACGAGCCCGAGAAGAAA 29372 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGT 32837 || ||||| || || ||||| || | || | |||| || || || || |||| | Sbjct 29371 ATCCCTTCAACAGCGGCAAACGCGACCAGACGCTCTGCAAAAGTGGAGCTTTTGTCGGAT 29312 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 |||||||| ||||| || |||||| ||| | ||| || || || || | |||| | Sbjct 29311 ATCCACTTCAAGGCCCAGTCTGCCTTCCGTTTGATACAGGGAATGGTTTCAACGGCATCA 29252 Query 32898 AAGAGATAGtttttttCATTACT--ATCTTTAACATATGTATCAATCAAAAGACTATACA 32955 || ||||| || | ||| ||||| | || || || || | || || Sbjct 29251 AAAAGATA--TTCGCGCTCCACTGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATG 29194 Query 32956 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAA 33015 | || ||||| || ||||| || || || || || |||||||| | ||||||| | Sbjct 29193 TCTCGGAATGGATATTTTCCATCATGATCTGGAAGCCATAGAAGCACCGGGCCTCGGCAG 29134 Query 33016 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 33075 || ||||| || | || |||||| | || || || || ||||| ||||| || | Sbjct 29133 CTTGAACTTCATTAGAGAAACGTTCTACCAAGTTCTCGTTGACTATGCCGTCGGACGCCG 29074 Query 33076 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGTGTTA--GTTTATTCC 33132 |||| || || | || || || |||| ||| | | || | | | || |||| Sbjct 29073 CAAAGAAGGCGAGAACGTGGGAGATGAAATGCCGCTCGTTGTCGTTTAAACGATTGTTCC 29014 Query 33133 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 | || | | || || || | |||| || || | ||||| || || ||||| || | Sbjct 29013 AGTCGTGAAGGTCCTTTGAAAGGTCCATCTCCTCGGCGGTCCAGAACGAAGCCTCCGCTT 28954 Query 33193 TTTTATACATATTCCAGAT 33211 | || ||||| | ||| || Sbjct 28953 TCTTGTACATTTGCCATAT 28935 >seq204124 Length=22413 Score = 147 bits (162), Expect = 3e-30 Identities = 373/562 (66%), Gaps = 8/562 (1%) Strand=Plus/Minus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 || ||| || ||||| ||| | || ||||| | || || || ||||||||||| || Sbjct 6697 CAGACAAGCAAAATCCGTGTGCATGCCTTCGTCCCGGCTGATCAACTCGTTGGAAAAGGT 6638 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 || || ||||| | |||||||| || | ||| || || |||||||| ||||| ||||| Sbjct 6637 AAGACCTGGCATCAAACCACGCTTCTTCATCCAGAAAATAGACGCAAAAGATCCGGAAAA 6578 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGCGCTGTC 32833 ||| || || || || || || || || | || | ||||| || | | | |||| Sbjct 6577 GAAGATGCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCGAATGTCGAGTCTTTGTC 6518 Query 32834 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 |||||| || | ||||| |||||||| ||| | || || || ||||| | ||| Sbjct 6517 GGATATCCAATTGAGTGCCCAGTCGGCCTTGCGTTTGATGCATGGGATGGTCTCGACAGC 6458 Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 32953 | |||||| || | ||| || || | || ||||| || | || || Sbjct 6457 GTCAAAGAGGTACTCGCGTTCGGCTGGGTCCTTGATGTACGTATCGATGAGGAGCGAGTA 6398 Query 32954 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGT 33013 | |||||||| |||||||| || ||||| || || ||||| || | ||||||| Sbjct 6397 TGTCTCCGAATGGATGTTTTCCATCATGATTTGGAAGCCATAGAAACACCGTGCCTCGGC 6338 Query 33014 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 33073 | || ||||| | | || || || | | ||| || || || || |||||| || Sbjct 6337 AGCTTGAACTTCGTTTGAGAAGCGCTCGACCAGATTCTCGTTGACAATCCCGTCAGAAGC 6278 Query 33074 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTTTAT--- 33129 || ||||| || || || || ||||| | ||||| || ||| ||||| | Sbjct 6277 GGCGAAAAAGGCTAAAACGTGAGAAATAAAGTGGCGTTCGT-TGTCGTTGAGTTTGTTTG 6219 Query 33130 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 33189 |||| || | | || || || | |||| ||| || | |||||||| || || || | Sbjct 6218 TCCAGTCGTGAAGGTCCTTCGACAAGTCCATTTCCTCTGCAGTCCAAAACGAAGCTTCAG 6159 Query 33190 CCTTTTTATACATATTCCAGAT 33211 | || |||||||| | ||| || Sbjct 6158 CTTTCTTATACATCTGCCATAT 6137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632012214836800