Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq201019 174 2e-38 seq204124 159 4e-34 >seq201019 Length=96896 Score = 174 bits (192), Expect = 2e-38 Identities = 385/575 (67%), Gaps = 3/575 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | || || || || || | ||||||| ||| || | Sbjct 29492 GCAAGCAAAGTCGGTGTGCATCCCCTCATCGCGGCTGATGAGCTCATTGGAGAAAGTAAG 29433 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | ||| ||||| || || | |||||| || || ||||| || || || || Sbjct 29432 GCCGGGCATCAGGCCTCGCTTTTTCATCCAAAAGATGGACGCAAACGAGCCCGAGAAGAA 29373 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || ||||| || || ||||| || || | ||| || |||||| | | | || | Sbjct 29372 AATCCCTTCAACAGCGGCAAACGCGACCAGACGCTCTGCAAAAGTGGAGCTTTTGTCGGA 29313 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 ||||| || || ||||| || || || || ||||| || | ||||| | || | Sbjct 29312 TATCCACTTCAAGGCCCAGTCTGCCTTCCGTTTGATACAGGGAATGGTTTCAACGGCATC 29253 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 ||| || || || ||||| | | ||| ||||| || ||||| | || || || | Sbjct 29252 AAAAAGATATTCGCGCTCCACTGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATGT 29193 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 || ||||||| ||| ||||| || ||||| || ||||| || | || || | Sbjct 29192 CTCGGAATGGATATTTTCCATCATGATCTGGAAGCCATAGAAGCACCGGGCCTCGGCAGC 29133 Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 || ||||| | ||| || | ||||| | || || |||||||| || ||||| || || Sbjct 29132 TTGAACTTCATTAGAGAAACGTTCTACCAAGTTCTCGTTGACTATGCCGTCGGACGCCGC 29073 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAA--GCTTATCCCA 93567 ||| || || | | || || ||||| ||| | || ||||| | || | ||| Sbjct 29072 AAAGAAGGCGAGAACGTGGGAGATGAAATGCCGCTCGTTGTCGTTTAAACGATTGTTCCA 29013 Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627 ||| || || |||||||| || | || ||| | ||||| ||||| || || ||||| Sbjct 29012 GTCGTGAAGGTCCTTTGAAAGGTCCATCTCCTCGGCGGTCCAGAACGAAGCCTCCGCTTT 28953 Query 93628 TTTGTACATATCCCATATGTCTTGATATTGAATTG 93662 |||||||| | |||||| | ||| | |||| || Sbjct 28952 CTTGTACATTTGCCATATCTGTTGGTCGTGAACTG 28918 >seq204124 Length=22413 Score = 159 bits (176), Expect = 4e-34 Identities = 370/557 (66%), Gaps = 3/557 (1%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||| || || || | |||||||| || |||||||| ||| || || | | Sbjct 6693 CAAGCAAAATCCGTGTGCATGCCTTCGTCCCGGCTGATCAACTCGTTGGAAAAGGTAAGA 6634 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 ||||| | || || || ||||| | ||| || || || |||||| || ||||| || Sbjct 6633 CCTGGCATCAAACCACGCTTCTTCATCCAGAAAATAGACGCAAAAGATCCGGAAAAGAAG 6574 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 || || || || || || || || || | |||||| | || | | | || | Sbjct 6573 ATGCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCGAATGTCGAGTCTTTGTCGGAT 6514 Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 ||||| || | ||||| ||||| || || || || || | || |||| ||||| | Sbjct 6513 ATCCAATTGAGTGCCCAGTCGGCCTTGCGTTTGATGCATGGGATGGTCTCGACAGCGTCA 6454 Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 || ||||| || || ||| | | || ||||| |||||||| | || || || | Sbjct 6453 AAGAGGTACTCGCGTTCGGCTGGGTCCTTGATGTACGTATCGATGAGGAGCGAGTATGTC 6394 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 || ||||||| || ||||| |||||||| || |||||||| | || || | Sbjct 6393 TCCGAATGGATGTTTTCCATCATGATTTGGAAGCCATAGAAACACCGTGCCTCGGCAGCT 6334 Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511 || ||||| | || || | ||| || ||||| || ||||| || || || || || || Sbjct 6333 TGAACTTCGTTTGAGAAGCGCTCGACCAGATTCTCGTTGACAATCCCGTCAGAAGCGGCG 6274 Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATC---CCAA 93568 ||||| || || | || ||||| || || | || || || || | ||| Sbjct 6273 AAAAAGGCTAAAACGTGAGAAATAAAGTGGCGTTCGTTGTCGTTGAGTTTGTTTGTCCAG 6214 Query 93569 TCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTT 93628 ||| || || || || | || | ||| || ||||||||||||| ||||| ||||| Sbjct 6213 TCGTGAAGGTCCTTCGACAAGTCCATTTCCTCTGCAGTCCAAAACGAAGCTTCAGCTTTC 6154 Query 93629 TTGTACATATCCCATAT 93645 || ||||| | |||||| Sbjct 6153 TTATACATCTGCCATAT 6137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555437268893920