Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq204495 152 9e-32 seq203452 96.9 6e-15 >seq204495 Length=136544 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || |||||||| || ||||| || || ||||| Sbjct 14674 CCGCCACGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCGGAA 14733 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | || || ||||| || || | | ||| || ||||| ||| Sbjct 14734 AGAGTTCGTCCGTCCTCGAGTTGTTTGCCGGCAAAGATCAAGCGTTGCTGATCGGGAGGA 14793 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| |||||||| || ||| ||||| || || | |||||| || Sbjct 14794 ATGCCTTCCTTGTCTTGGATCTTTGCTTTCACGTTGTCGATAGTATCGGATGATTCGACC 14853 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || ||||| ||||| ||||| || ||||| Sbjct 14854 TCCAACGTGATGGTCTTCCCGGTGAGCGTCTTCACGAAAATTTGCAT 14900 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 || || | |||||| ||||| || || || | || || ||||| |||||||| |||||| Sbjct 14518 TCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTG 14577 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || || ||||| ||||| ||| ||||||||||| | || ||||| |||||||||||| Sbjct 14578 TCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGACGACTCTACCTCCAAGGTGATG 14637 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || | ||||| || || |||||||| Sbjct 14638 GTCTTGCCTGTCAACGTCTTCACAAAAATCTGCAT 14672 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| ||||| || ||||||||| ||||| ||||| | ||| || |||||| Sbjct 15080 CCCTCCTTGTCCTGAATTTTCGCCTTGACGTTATCGATCGTGTCCGATGACTCGACTTCC 15139 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||| || || || |||||||||||||||||||| |||||||| Sbjct 15140 AGGGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 15183 >seq203452 Length=5053 Score = 96.9 bits (106), Expect = 6e-15 Identities = 124/170 (73%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || | ||| || || ||||| ||||| ||||| ||| | | | ||| ||| Sbjct 652 GTGAAGAGTAGCCTCCTTCTGAATGTTGTAATCAGAGAGCGTCTTACTGTTTTCATGCTG 711 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || || | || || | || || ||||| || |||||||| ||||| Sbjct 712 CTTTCCAGCAAAGATAAGGCGCTGCTGACCAGG-GGCATGCCGTCTTTGTCTTGGATCTT 770 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGG 68427 || ||||| ||||||||||||| ||| || || ||||| ||||||| Sbjct 771 CGCTTTGACATTGTCGATGGTGTCTGATGACTCCACGTCCAACGTGATGG 820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919266410577760