Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq204496 93.3 4e-14 seq203754 89.7 4e-13 seq204495 84.2 2e-11 >seq204496 Length=81202 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | || ||||| | || || || ||||||||||| || |||||| Sbjct 37325 CCACCACGGAGACGAAGCACCAAATGAAGAGTCGACTCCTTTTGAATGTTATAGTCGCTC 37384 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| ||| ||| || ||||| || || ||| ||||||||||||||||||| || || Sbjct 37385 AAAGTGCGACCATCCTCCAGTTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGTGGG 37444 Query 114276 ATGC 114279 |||| Sbjct 37445 ATGC 37448 >seq203754 Length=64599 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || |||||||||||||| || ||||||| || || ||| ||||| ||||| || Sbjct 436 GTCGACTCTTTTTGAATGTTATAGTCGCTCAATGTTCGGCCATCCTCAAGCTGTTTTCCC 377 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGC 114279 ||| | |||||||||||||||||||| || |||| Sbjct 376 GCGAAAATGAGACGCTGTTGGTCCGGGGGGATGC 343 >seq204495 Length=136544 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || |||||||| || | | || | || | || || || || || || ||||| ||| Sbjct 14671 ATCCCGCCACGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCG 14730 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || || || |||||||| || || |||| | || || || || ||| Sbjct 14731 GAAAGAGTTCGTCCGTCCTCGAGTTGTTTGCCGGCAAAGATCAAGCGTTGCTGATCGGGA 14790 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| ||| | | || | || |||| |||||| Sbjct 14791 GGAATGCCTTCCTTGTCTTGGATCTTTGCTTTCACGTTGTCGATAGTATCGGATGATTCG 14850 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || |||| || | || || ||||| || || || || ||||| |||||| || Sbjct 14851 ACCTCCAACGTGATGGTCTTCCCGGTGAGCGTCTTCACGAAAATTTGCATGCCT 14904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419087239690896