Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq141445 91.5 1e-13 >seq141445 Length=131 Score = 91.5 bits (100), Expect = 1e-13 Identities = 72/84 (86%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 114342 GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAACCAAAACTG 114398 |||||||||||||||| ||||||||||||| || | || |||||||||||||| ||||| Sbjct 2 GCTCTAGAATTACCACAGTTATCCAAGTAATTGTGGATACGATCTAAGGAACCATAACTG 61 Query 114399 ATATATTGAGCCATTCGTGGTATC 114422 ||||| |||||| || | ||| || Sbjct 62 ATATAATGAGCCTTTTGCGGTTTC 85 Score = 91.5 bits (100), Expect = 1e-13 Identities = 72/84 (86%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 115539 GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAACCAAAACTG 115595 |||||||||||||||| ||||||||||||| || | || |||||||||||||| ||||| Sbjct 2 GCTCTAGAATTACCACAGTTATCCAAGTAATTGTGGATACGATCTAAGGAACCATAACTG 61 Query 115596 ATATATTGAGCCATTCGTGGTATC 115619 ||||| |||||| || | ||| || Sbjct 62 ATATAATGAGCCTTTTGCGGTTTC 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396072745295416