Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq201019 100 3e-16 >seq201019 Length=96896 Score = 100 bits (110), Expect = 3e-16 Identities = 340/521 (65%), Gaps = 9/521 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | ||||| || ||| |||||| ||||| ||||| || || Sbjct 29488 GCAAAGTCGGTGTGCATCCCCTCATCGCGGCTGATGAGCTCATTGGAGAAAGTAAGGCCG 29429 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| || || ||||| |||| ||| || || | ||| || ||||||||||| || Sbjct 29428 GGCATCAGGCCTCGCTTTTTCATCCAAAAGATGGACGCAAACGAGCCCGAGAAGAAAATC 29369 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAA 126225 || || ||| || ||||| | |||||||| ||||| | | | | ||||| | | Sbjct 29368 CCTTCAACAGCGGCAAACGCGACCAGACGCTCTGCAAAAGTG-GAGCTTTTGTCGGATAT 29310 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 |||||||| ||||| | ||||| | |||||| || | ||| | | || ||||| Sbjct 29309 CCACTTCAAGGCCCAGTCTGCCTTCCGTTTGATACAGGGAATGGTTTCAACGGCATCAAA 29250 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 || | | || ||| ||||||||||| | || ||||| || ||||| || Sbjct 29249 AAGATATTCGCGCTCCACTGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTC 29190 Query 126346 GCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404 | |||| ||| ||| || | ||| | | ||||| | || || ||| | Sbjct 29189 GGAATGGATATTTTCCATCAT-GATCTGGAAGCCATAGAAGCACCGGGCCTCGGCAGCTT 29131 Query 126405 GTACCTCATCGGCAAAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCA 126463 | || |||| | | || ||| | | ||||| || || || |||||| | ||| Sbjct 29130 GAACTTCATTAG-AGAAACGTTCTACCAAGTTCTCGTTGACTATGCCGTCGGACGCCGCA 29072 Query 126464 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 126520 || || || || | | ||||| | | | || || ||||| | | | |||||| Sbjct 29071 AAGAAGGCGAGAACGTGGGAGATGAAATGCCGCTCGTTGTCGTTTAAACGATTGTTCCAG 29012 Query 126521 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||| ||| ||||| || || || | |||||| || ||||| Sbjct 29011 TCGTGAAGGTCCTTTGAAAGGTCCATCTCCTCGGCGGTCCA 28971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595826555124640