Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq204495 104 2e-17 seq201019 91.5 1e-13 >seq204495 Length=136544 Score = 104 bits (114), Expect = 2e-17 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||| | |||||||||||||| || |||||||||||| Sbjct 14518 TCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTG 14577 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| ||| ||| | |||| |||| |||||||| ||| || || | ||| | Sbjct 14578 TCCTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGACGACTCTACCTCCAAGGTGAT 14636 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| |||| || || |||||||||||||| Sbjct 14637 GGTCTTGCCTGTCAACGTCTTCACAAAAATCTGCAT 14672 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||| ||| | || || || || || ||||| || Sbjct 14704 GTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTTCGTCCGTCCTCGAGTTGTTTGCCG 14763 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT- 127035 || ||||||| || |||||||||||||| ||||| |||||||| ||| || ||||| Sbjct 14764 GCAAAGATCAAGCGTTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTT-TGCTTT 14822 Query 127036 -GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 |||| |||| || || | ||||| || | || | || || ||||| || | Sbjct 14823 CACGTTG-TCGATAGTATCGGATGATTCGACCTCCAACGTGATGGTCTTCCCGGTGAGCG 14881 Query 127095 TTTTTACAAAAATCTGCATGGCT 127117 | || || ||||| |||||| || Sbjct 14882 TCTTCACGAAAATTTGCATGCCT 14904 >seq201019 Length=96896 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 47085 AAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCACTCTGGCCGAACGTTTG 47144 ||||| || |||||| |||||| || || ||| | |||| | || || ||| || Sbjct 29286 AAGGCAGACTGGGCCTTGAAGTGGATATCCGACAAAAGCTCCACTTTTGCAGAGCGTCTG 29345 Query 47145 ATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTAC 47204 |||| || ||| || || || | |||||||||||| |||||| | || |||| Sbjct 29346 GTCGCGTTTGCCGCTGTTGAAGGGATTTTCTTCTCGGGCTCGTTTGCGTCCATCTTTTGG 29405 Query 47205 ATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGAC 47264 ||||||| ||| | ||||||||||| || || ||| ||||| ||| | || Sbjct 29406 ATGAAAAAGCGAGGCCTGATGCCCGGCCTTACTTTCTCCAATGAGCTCATCAGCCGCGAT 29465 Query 47265 GAAGGCCTGCACACCAACTTTGCCTGTCTC 47294 || || |||||||| ||||||| || ||| Sbjct 29466 GAGGGGATGCACACCGACTTTGCTTGCCTC 29495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474285253529920