Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq204495 134 2e-26 >seq204495 Length=136544 Score = 134 bits (148), Expect = 2e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||||||||| ||||| || |||| ||||| || |||||||| || Sbjct 14709 CTCCTTCTGGATATTGTAGTCGGAAAGAGTTCGTCCGTCCTCGAGTTGTTTGCCGGCAAA 14768 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||||||| ||||| |||| || | || |||||||| |||||| | ||| ||| Sbjct 14769 GATCAAGCGTTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTT-TGCTTTCACGT 14827 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| ||||| || |||| ||||||||| || || || ||||| || | Sbjct 14828 TGTCGATAGTATCGGATGATTCGACCTCCAACGTGATGGTCTTCCCGGTGAGCGTCTTCA 14887 Query 46581 CAAAGATTTGCAT 46593 | || |||||||| Sbjct 14888 CGAAAATTTGCAT 14900 Score = 107 bits (118), Expect = 2e-18 Identities = 119/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||||||||| || || | ||||||||| |||| || | || ||||||| Sbjct 14518 TCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTG 14577 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||||| ||| | ||| | | | ||||| ||| || || |||| ||||| Sbjct 14578 TCCTGGATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGACGACTCTACCTCCAAGGTGAT 14636 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| |||| ||| || ||||| || ||||| Sbjct 14637 GGTCTTGCCTGTCAACGTCTTCACAAAAATCTGCAT 14672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563793452816160