Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq203767 116 1e-20 seq204304 84.2 9e-11 >seq203767 Length=53171 Score = 116 bits (128), Expect = 1e-20 Identities = 183/262 (70%), Gaps = 9/262 (3%) Strand=Plus/Plus Query 451344 ATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATG 451403 ||||||||||||| |||||||| ||||| || || |||||| ||||| ||| | || | Sbjct 49056 ATTTCAATGATGCTCAACGGCAGGCAACGAAGGACGCAGGAACGATTGCGGGTCTCAACG 49115 Query 451404 TTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAA 451463 | ||||| || || || || ||||| || |||||| | || || || || | | Sbjct 49116 TGCTTCGCATCATCAACGAGCCTACCGCTGCTGCTATCGCCTACGGTCT-------TAAC 49168 Query 451464 AAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTT 451523 ||||| || ||| | || | || | |||| ||||||| |||||| ||| || Sbjct 49169 AAGAAGAAG--GAATCCCAGATCATCGTCTATGATCTTGGTGGTGGAACTTTCGATGTTT 49226 Query 451524 CTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATC 451583 | | | || || || ||||| || || || || ||||||| |||||| || |||| Sbjct 49227 CCCTTTTGTCCATCGATGATGGTGTTTTCGAGGTCTTGGCAACCGCTGGTGACACCCATC 49286 Query 451584 TAGGAGGTGAAGATATTGATAA 451605 | ||||| ||||| |||| || Sbjct 49287 TCGGAGGAGAAGACTTTGACAA 49308 >seq204304 Length=128263 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || ||||||||||| || ||||| || || |||||||| || || ||| || || Sbjct 51777 CCCGAAGAAATTTCTTCCATGGTCCTCTTGAAGATGAAAGAGACGGCCGAATCTTACCTT 51718 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || | || ||| | || || | || ||||||||||| ||||| || | |||||| Sbjct 51717 GGAACCCCGATTAACAACGCCGTCGTCACCGTTCCCGCTTACTTCAACGACTCCCAACGG 51658 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || ||||| || ||||| || || |||| | || || || || || || || || Sbjct 51657 CAGGCAACAAAGGATGCTGGTACCATCTCTGGCATGAACGTCCTCCGTATCATCAACGAG 51598 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACT 451452 ||||| || || || | ||||| || || Sbjct 51597 CCTACTGCCGCCGCCATTGCATACGGTCT 51569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1970541506574864