Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq204124 98.7 1e-15 >seq204124 Length=22413 Score = 98.7 bits (108), Expect = 1e-15 Identities = 234/343 (68%), Gaps = 8/343 (2%) Strand=Plus/Plus Query 101993 TTTCTATGCGTATCAATGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 102051 |||||||| | ||| |||| ||| ||| | ||| |||||||||| |||| Sbjct 6352 TTTCTATGGCTTCCAAA-TCATGATGGAAAACATCCATTCGGAGACATACTCGCTCCTCA 6410 Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 102111 | || | ||| || ||||| || || || | |||||||| || || | || Sbjct 6411 TCGATACGTACATCAAGGACCCAGCCGAACGCGAGTACCTCTTTGACGCTGTCGAGACCA 6470 Query 102112 TTCCATGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGCG 102169 | ||||| || |||| | ||| | || ||||| | || ||| | | |||||| | || Sbjct 6471 TCCCATGCAT-CAAACGCAAGGCCGACTGGGCACTCAATTGGATATCCGACAAAGACTCG 6529 Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229 | || | || || ||| |||| || || ||||||||| |||||||| || || || Sbjct 6530 A-CATTCGGAGAACGTCTCGTCGCTTTCGCCGCTGTTGAGGGCATCTTCTTTTCCGGATC 6588 Query 102230 CTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 || |||| |||||| ||| | |||||||| ||| | ||||||||||| ||| |||| Sbjct 6589 TTT-TGCGTCTATTTTCTGGATGAAGAAGCGTGGTTTGATGCCAGGTCTTACCTTTTCCA 6647 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| | ||| || ||||| || | ||| || ||||| Sbjct 6648 ACGAGTTGATCAGCCGGGACGAAGGCATGCACACGGATTTTGC 6690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619155565165760