Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq204124 122 1e-22 seq201019 96.9 4e-15 >seq204124 Length=22413 Score = 122 bits (134), Expect = 1e-22 Identities = 333/502 (66%), Gaps = 10/502 (2%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 ||||| ||||| ||| | ||| || ||| ||| || ||||| | || | ||| Sbjct 6672 CCTTCGTCCCGGCTGATCAACTCGTTGGAAAAGGTAAGACCTGGCATCAAACCACGCTTC 6613 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || | ||| || || | |||| ||| ||||||||||||||||| ||| ||||||| Sbjct 6612 TTCATCCAGAAAATAGACGCAAAAGATCCGGAAAAGAAGATGCCCTCAACAGCGGCGAAA 6553 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGAC-TTGTCG---AACCACTTGAGAGCCCAGTT 119689 |||| ||||| || | || |||||| | |||||| | ||| ||||| ||||||| Sbjct 6552 GCGACGAGACGTTC-TCCGAATGTCGAGTCTTTGTCGGATATCCAATTGAGTGCCCAGTC 6494 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTCAGC 119749 |||||| || | ||||| |||| || | || || || || || | || ||| || Sbjct 6493 GGCCTTGCGTTTGATGCATGGGATGGTCTCGACAGCGTCAAAGAGGTACTCGCGTTCGGC 6434 Query 119750 ACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCATTT-CAT 119808 ||||| || || |||| ||||| ||||| ||||| ||| | ||| ||| Sbjct 6433 TGGGTCCTTGATGTACGTATCGATGAGGAGCGAGTATGTCTCCGAATGGATGTTTTCCAT 6374 Query 119809 TGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGCAAAAT 119868 || || || |||| || | || || |||| | ||| ||||||| | || Sbjct 6373 CATG-ATTTGGAAGCCATAGAAACACCGTGCCTCGGCAGCTTGAACTTCGTTTGAGAAGC 6315 Query 119869 TGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGATGTACT 119928 | | | ||| || ||||| || || || | ||||| || ||||| | || Sbjct 6314 GCTCGACCAGATTCTCGTTGACAATCCCGTCAGAAGCGGCGAAAAAGGCTAAAACGTGAG 6255 Query 119929 TTATGAATTTCTGTTCATTATCGTTGAG--TGTTT-TCCAGTCGTCCATATCTTTAGACA 119985 || || | |||| || |||||||| ||||| ||||||||| | || || |||| Sbjct 6254 AAATAAAGTGGCGTTCGTTGTCGTTGAGTTTGTTTGTCCAGTCGTGAAGGTCCTTCGACA 6195 Query 119986 AGTCCACCTCTTCAGCTGTCCA 120007 |||||| || || || ||||| Sbjct 6194 AGTCCATTTCCTCTGCAGTCCA 6173 >seq201019 Length=96896 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/227 (71%), Gaps = 7/227 (3%) Strand=Plus/Minus Query 119513 CCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTT 119572 ||| ||||| || |||||||||||| ||| ||| || ||||| || |||| || Sbjct 29471 CCCCTCATCGCGGCTGATGAGCTCATTGGAGAAAGTAAGGCCGGGCATCAGGCCTCGCTT 29412 Query 119573 CTTTAGCCAAAAGATGGCACAAAAAC-TTCCAGAAAAGAAGATGCCCTCCACACAGGCGA 119631 || | ||||||||||| || |||| || || ||||| || || || ||| ||| | Sbjct 29411 TTTCATCCAAAAGATGG-ACGCAAACGAGCCCGAGAAGAAAATCCCTTCAACAGCGGCAA 29353 Query 119632 AAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTCG---AACCACTTGAGAGCCCAG 119687 | |||| |||||||| |||||| || ||| |||||| | |||||| | |||||| Sbjct 29352 ACGCGACCAGACGCTCTGCAAAA-GTGGAGCTTTTGTCGGATATCCACTTCAAGGCCCAG 29294 Query 119688 TTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 | ||||| || | || ||||| | |||| | ||| || ||||| Sbjct 29293 TCTGCCTTCCGTTTGATACAGGGAATGGTTTCAACGGCATCAAAAAG 29247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587470371202400