Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq204495 138 3e-27 seq203452 89.7 1e-12 >seq204495 Length=136544 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||||||||| || || |||||||| |||| |||||||| || || ||| Sbjct 14692 ACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTTCGTCCGTCCTCG 14751 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || || ||||| | ||||| || || |||||||||||||| |||||||| Sbjct 14752 AGTTGTTTGCCGGCAAAGATCAAGCGTTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGG 14811 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| || ||||| || || || || || ||| || || | || | ||||| Sbjct 14812 ATCTTTGCTTTCACGTTGTCGATAGTATCGGATGATTCGACCTCCAACGTGATGGTCTTC 14871 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 14872 CCGGTGAGCGTCTTCACGAAAATTTGCAT 14900 Score = 100 bits (110), Expect = 6e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 || ||||||||||| || || |||||||| || || || || || |||||||| || ||| Sbjct 14518 TCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTG 14577 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 || || || || ||| ||||| || ||||||||||| || || || | ||| | Sbjct 14578 TCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGACGACTCTACCTCCAAGGTGATG 14637 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| |||||||| || || || || | ||||| Sbjct 14638 GTCTTGCCTGTCAACGTCTTCACAAAAATCTGCAT 14672 Score = 93.3 bits (102), Expect = 9e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| |||||||| |||||||| || || || | || || | ||||||||| Sbjct 14920 ACAAGATGAAGGGTGGACTCCTTTTGAATGTTATAGTCCGAGAGCGTGCGTCCATCTTCG 14979 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 || ||||| || ||||| ||||| |||||||| || ||||| || Sbjct 14980 AGTTGCTTGCCGGCGAAAATAAGACGTTGTTGATCGGGAGGGAT 15023 >seq203452 Length=5053 Score = 89.7 bits (98), Expect = 1e-12 Identities = 110/149 (74%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 ||||||||||| | ||| || ||||| |||||||| | || || | | | ||| || Sbjct 650 AGGTGAAGAGTAGCCTCCTTCTGAATGTTGTAATCAGAGAGCGTCTTACTGTTTTCATGC 709 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || || |||||||| || || || | || || ||||| ||||||||||| || Sbjct 710 TGCTTTCCAGCAAAGATAAGGCGCTGCTGACCAGG-GGCATGCCGTCTTTGTCTTGGATC 768 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGA 195083 || ||||| || || |||||||| || Sbjct 769 TTCGCTTTGACATTGTCGATGGTGTCTGA 797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106574471129636