Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq204495 100 2e-15 >seq204495 Length=136544 Score = 100 bits (110), Expect = 2e-15 Identities = 158/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||||||| || || ||||| || ||| | ||| |||||||| || | |||||| Sbjct 14682 GAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGG--ATATTGTAGTCGGAAAGAGTT 14739 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | || || |||||||| |||||||| || | | ||||||||| |||||||| ||| Sbjct 14740 CGTCCGTCCTCGAGTTGTTTGCCGGCAAAGATCAAGCGTTGCTGATCGGGAGGAATGCCT 14799 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAG 563432 || || ||||| || ||| ||| || || || ||||| | ||| | | || | Sbjct 14800 TCCTTGTCTTGGATCTTTGCTTTCACGTTGTCGATAGTATCGGA-TGATTCGACCTCCAA 14858 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || || || || || || || |||||||||||||| Sbjct 14859 CGTGATGGTCTTCCCGGTGAGCGTCTTCACGAAAATTTGCAT 14900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4018480694628920