Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq203715 95.1 6e-15 >seq203715 Length=28578 Score = 95.1 bits (104), Expect = 6e-15 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 25937 AATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCG 25996 || ||||| |||||||| | |||||||| || || | || | ||| || || || Sbjct 23030 AACAAATCAGGAATCCAAAGGGCATAAAACAAGTCACGAGCACGAGATTCCTCCTTGCCA 22971 Query 25997 TGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATA 26056 ||||| || ||||| ||||| ||||| || || | |||||| ||||| | |||||| Sbjct 22970 TGATTTTTGCGCAGATCCAAGAAGTCAAAGATGTCGGCGTGCCACGGTTCGATGTAGATA 22911 Query 26057 GCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGT 26106 |||||| ||| | ||| ||||||||||| ||||||||||| || Sbjct 22910 GCAAAAGCACCCGGACGTTTGTTGCCACCTTGATCAACGTATCTTGCTGT 22861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252409312666100