Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq204304 192 8e-44 seq204495 161 1e-34 seq203756 134 2e-26 seq203452 132 6e-26 seq203767 123 3e-23 seq203754 98.7 1e-15 >seq204304 Length=128263 Score = 192 bits (212), Expect = 8e-44 Identities = 256/356 (72%), Gaps = 0/356 (0%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 |||||||||||||| || ||||| | | |||||||| ||||| || ||||||| | | Sbjct 51777 CCCGAAGAAATTTCTTCCATGGTCCTCTTGAAGATGAAAGAGACGGCCGAATCTTACCTT 51718 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | | | || | || || || || || || |||||||||| || || ||||| Sbjct 51717 GGAACCCCGATTAACAACGCCGTCGTCACCGTTCCCGCTTACTTCAACGACTCCCAACGG 51658 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| |||||||| |||| | | || | || | ||| || | || ||||| || Sbjct 51657 CAGGCAACAAAGGATGCTGGTACCATCTCTGGCATGAACGTCCTCCGTATCATCAACGAG 51598 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || ||||| || ||||| |||||||| | | ||| ||||| Sbjct 51597 CCTACTGCCGCCGCCATTGCATACGGTCTTGACAAGAAGGTTGTGGGAGAGCGCAATGTG 51538 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 |||||||| |||||||| || || ||||| ||||| || ||||||| || |||| || Sbjct 51537 TTGATCTTCGATCTCGGAGGAGGCACGTTCGATGTTTCGCTTCTCACAATCGAAGAAGGC 51478 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || |||||||| ||||| || || || || || ||| | || || || |||||||| Sbjct 51477 ATTTTCGAAGTCAAGGCCACCGCAGGAGACACACATTTGGGCGGCGAGGATTTCGA 51422 Score = 168 bits (186), Expect = 9e-37 Identities = 548/861 (64%), Gaps = 59/861 (7%) Strand=Plus/Minus Query 196039 AGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAA 196098 |||| ||||| || || | || |||| || || || || || || ||||||||||| Sbjct 51318 AGATCTTTCTTCCAACCCCCGTGCCGTTCGCCGTCTGAGAACCGCCTGCGAACGTGCCAA 51259 Query 196099 ACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAAT 196158 || |||||||| ||| | ||||||| | ||||| |||||| | || || || || Sbjct 51258 GCGCACTCTCTCATCTGCCACTCAAACCTCCATCGAGATCGATTCGCTCTTCGAAGGCAT 51199 Query 196159 TGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAG 196218 ||||| || ||| || | |||||||| || ||||| ||| | | || ||||| | Sbjct 51198 CGACTTTTACACATCTCTCACCCGTGCCCGCTTTGAGGAGCTCTGCCAGGACTTGTTCCG 51139 Query 196219 GAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGT 196278 | || || || || | || ||||| || | ||||| || ||| | || || Sbjct 51138 TGGCACCCTTGAGCCCGTGGAGAAGGTGCTTCGCGATTCCAAGATCGACAAGGCCAACGT 51079 Query 196279 TGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTT-- 196336 |||| || || || || || || || || |||||||| | | ||| || |||| Sbjct 51078 CCATGAGATAGTTCTCGTTGGCGGCTCCACTCGTATTCC-ACGTATCA--TGAAGCTTGT 51022 Query 196337 -TCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGC 196395 || ||| ||||| || || ||||| | || ||||| |||||||| ||||| Sbjct 51021 GTCCGACTTTTTCAACGGCAAGGAGCCCAACAAGAGCATTAACCCCGATGAAGCTGTTGC 50962 Query 196396 TTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGA 196455 || ||||| || || |||||||| ||||| || || | | | | || ||||| Sbjct 50961 GTACGGTGCCGCTGTGCAGGCTGCGATTCTTTCTGGGGATACTTCTGAGAAGACTCAAGA 50902 Query 196456 TCTTCTGCTACTTGATGTTGCACCCGTATCCCT-GGGT---------CTT---------- 196495 |||||| || || || || || || | || || |||| ||| Sbjct 50901 TCTTCTTCTCCTCGACGTCGCTCCATTGTCTCTAGGGTGAGTTTTTGCTTATAGCTTTGC 50842 Query 196496 ---------------------------------GAAACAGCGGGTGGTGTTATGACTAAA 196522 ||||| || || || || ||||| Sbjct 50841 CTTGTTGCTCTTAACTCACTTCCTCCTAGAATTGAAACCGCCGGAGGAGTGATGACCGCT 50782 Query 196523 ATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCC 196582 | || | ||||| || || |||| || || ||| || | ||||| ||||||||| Sbjct 50781 CTCATCAAGAGGAATACCACCGTTCCCACGAAAAAGTCTGAAATATTTTCGACGTATTCC 50722 Query 196583 GATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGAT 196642 || || ||||| |||||| || || || || ||||| ||||| | || | ||||| Sbjct 50721 GACAACCAACCTGGTGTTTTGATCCAGGTTTACGAAGGTGAACGTGCGCGCACGAAGGAC 50662 Query 196643 AACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCA 196702 ||| | |||||||| | || || | |||| ||||| | || || |||||||||| Sbjct 50661 AACAACCTACTTGGGAAGTTTGAGCTTTCGGGCATTCCTCCCGCCCCTCGAGGTGTTCCT 50602 Query 196703 CAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGAC 196762 || || | || ||||| || || || || || ||||| || || | |||| |||| Sbjct 50601 CAAGTTGAGGTGACTTTCGACATCGATGCGAACGGCATTCTCAATGTATCCGCTGCGGAC 50542 Query 196763 AAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAG 196822 || | | ||||| || | || || ||||| || ||||| || ||||| ||| Sbjct 50541 AAAACCACCGGCAAGTCAAATCGCATCACCATCACCAACGATAAGGGACGTCTTTCAAAG 50482 Query 196823 GAGGAAATTGAACGTATGGTT 196843 ||||| ||||| || |||||| Sbjct 50481 GAGGAGATTGAGCGCATGGTT 50461 >seq204495 Length=136544 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || ||||| || || || || || || ||||| | ||||| || || || Sbjct 14900 ATGCAAATTTTCGTGAAGACGCTCACCGGGAAGACCATCACGTTGGAGGTCGAATCATCC 14841 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| | ||||| ||||| ||||| |||||||||||||| ||||||||| Sbjct 14840 GATACTATCGACAACGTGAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAG 14781 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| | || ||||| || ||||| || || || ||||| || || | || ||||| Sbjct 14780 CAACGCTTGATCTTTGCCGGCAAACAACTCGAGGACGGACGAACTCTTTCCGACTACAAT 14721 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| ||||| ||||| || || Sbjct 14720 ATCCAGAAGGAGTCCACTCTTCACCTCGTCCT 14689 Score = 131 bits (144), Expect = 2e-25 Identities = 122/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || |||||||| || | || || || || |||||| | ||||| |||||||| Sbjct 14672 ATGCAGATTTTTGTGAAGACGTTGACAGGCAAGACCATCACCTTGGAGGTAGAGTCGTCG 14613 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || || ||||| || || ||||| |||||||| ||||||||| Sbjct 14612 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAG 14553 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGA 172016 || || ||||| ||||| || || ||||| || || Sbjct 14552 CAGCGCCTTATCTTTGCCGGCAAGCAGCTCGAGGA 14518 Score = 100 bits (110), Expect = 4e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| |||||||| || || || || ||||| || |||||||||||||| ||||| || Sbjct 15465 TATGCAGATCTTTGTTAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTC 15406 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || || |||||||| |||| |||||||| ||||| || || || Sbjct 15405 TGATACCATCGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGG 15361 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 171967 ATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACC 172026 || || |||||||| ||||| |||||||| || || || || || ||||||||||| || Sbjct 15023 ATCCCTCCCGATCAACAACGTCTTATTTTCGCCGGCAAGCAACTCGAAGATGGACGCACG 14964 Query 172027 CTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGT 172086 ||| | || || ||| ||||||||||||| || || || ||||| || | || || || Sbjct 14963 CTCTCGGACTATAACATTCAAAAGGAGTCCACCCTTCATCTTGTCCTGCGTCTCCGTGGA 14904 Query 172087 GG--TGCAA 172093 || ||||| Sbjct 14903 GGCATGCAA 14895 >seq203756 Length=38952 Score = 134 bits (148), Expect = 2e-26 Identities = 197/276 (71%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 195716 GTGAC--TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 ||||| ||| || || ||||||| || || || || ||| || |||||||||| | Sbjct 30011 GTGACAGTGTTCCCGCATACTTCAACGACTCTCAGCGGTTGGCCACCAAGGACGCTGGTT 29952 Query 195774 CTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTT 195833 | ||| | || || | ||| | || ||||| ||||| || || ||||| ||||||| Sbjct 29951 CCATTTCTGGCCTTGAGGTTCTCCGCATCATCAACGAACCTACCGCTGCTGCCATTGCTT 29892 Query 195834 ATGGTCTGGACAAGAA--CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 ||||||| ||| | ||| || ||| | || || | ||||| ||||||||||| Sbjct 29891 ATGGTCTTGACCGTCAATCAAAAACTGAGA--AGAACGTTCTCATCTTCGATCTCGGTGG 29834 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 || || ||||| || || || ||| | || | || ||| | || | ||| ||||| || Sbjct 29833 AGGAACTTTTGACGTTTCCCTCCTCCACATCAACGGGGGTGTCTTTGCAGTCAAGGCCAC 29774 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| ||| | || |||||||||||||| Sbjct 29773 CGCTGGCGATACCCATTTGGGAGGTGAAGATTTCGA 29738 >seq203452 Length=5053 Score = 132 bits (146), Expect = 6e-26 Identities = 132/170 (78%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 171898 ATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGAT 171957 ||||| | || || ||||| |||||||| ||||| || ||||||| ||||| ||||| Sbjct 818 ATCACGTTGGACGTGGAGTCATCAGACACCATCGACAATGTCAAAGCGAAGATCCAAGAC 759 Query 171958 AAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGAT 172017 || || ||||| || || | |||||| || ||||| |||||||| || |||| |||| | Sbjct 758 AAAGACGGCATGCC-CCTGGTCAGCAGCGCCTTATCTTTGCTGGAAAGCAGCATGAAAAC 700 Query 172018 GGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCT 172067 | || ||| ||||||||||| |||| |||||| ||||||| ||||| Sbjct 699 AGTAAGACGCTCTCTGATTACAACATTCAGAAGGAGGCTACTCTTCACCT 650 >seq203767 Length=53171 Score = 123 bits (136), Expect = 3e-23 Identities = 181/256 (71%), Gaps = 10/256 (4%) Strand=Plus/Plus Query 195734 TTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT 195793 |||| |||| | ||||| ||||| || |||||||| | | ||||||||||| ||| Sbjct 49058 TTCAATGATGCTCAACGGCAGGCAACGAAGGACGCAGGAACGATTGCGGGTCTCAACGTG 49117 Query 195794 CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAG 195853 ||| | || ||||| || || || || ||||| || || || ||||| ||||||| ||| Sbjct 49118 CTTCGCATCATCAACGAGCCTACCGCTGCTGCTATCGCCTACGGTCTTAACAAGAAGAAG 49177 Query 195854 GA--CGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCAC 195911 || | |||| | | ||| |||||| |||||||| || || ||||| || | Sbjct 49178 GAATCCCAGATCA--------TCGTCTATGATCTTGGTGGTGGAACTTTCGATGTTTCCC 49229 Query 195912 TTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAG 195971 || | || || | |||| | ||||| || ||| || |||||||| || ||||| | Sbjct 49230 TTTTGTCCATCGATGATGGTGTTTTCGAGGTCTTGGCAACCGCTGGTGACACCCATCTCG 49289 Query 195972 GTGGTGAAGATTTCGA 195987 | || ||||| || || Sbjct 49290 GAGGAGAAGACTTTGA 49305 >seq203754 Length=64599 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||||||||| || || || || || ||||||||||| |||||||| Sbjct 188 ATGCAGATTTTCGTGAAAACCCTCACGGGGAAGACGATTACCCTCGAGGTAGAGTCGTCC 247 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || |||||||| || ||||||| || || ||||| || ||||| Sbjct 248 GATACAATCGACAATGTCAAAGCAAAAATACAAGACAAAGAAGG 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656180673453760