Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq204495 95.1 2e-14 >seq204495 Length=136544 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| |||||||| | |||| || || | |||||| |||||||| || || | Sbjct 14719 ATATTGTAGTCGGAAAGAGTTCGTCCGTCCTCGAGTTGTTTGCCGGCAAAGATCAAGCGT 14778 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || ||||| ||||| || ||||| || ||||| || || | ||| | || |||||| Sbjct 14779 TGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTTTGCTTTCACGTTGTCGATAGTA 14838 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||| || || || || | || || || || || || ||||| || || || |||||| Sbjct 14839 TCGGATGATTCGACCTCCAACGTGATGGTCTTCCCGGTGAGCGTCTTCACGAAAATTTGC 14898 Query 193359 AT 193360 || Sbjct 14899 AT 14900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897354568474560