Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq203715 96.9 1e-14 seq201019 95.1 4e-14 seq203459 93.3 1e-13 >seq203715 Length=28578 Score = 96.9 bits (106), Expect = 1e-14 Identities = 182/268 (68%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 156230 AGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAA 156289 ||| | | |||| ||||| || || || |||| ||| | | || ||||||| || | Sbjct 22668 AGTGTCGTAAATTCCTTCTATCGAGTCGTCTTTCATGCAAACAAGGAAGCACGAGCTCAT 22609 Query 156290 TTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATT 156349 ||| || | |||||||| || ||||| || || |||| |||||| | || || | Sbjct 22608 TTGGGGATGGGGTGTTCCGGCATTGAAAAGGGTTGGTGAAGCATGAGTGAAGAACCGTTC 22549 Query 156350 AGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGA 156409 ||||| | ||| ||||| | || || | || ||||| |||| || || Sbjct 22548 CGACATGAGGTTGTAGGTCTCAACCACGCGTTCTAGGTCGGATCCGTGTATACCGACAGC 22489 Query 156410 GACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTA 156469 || | |||| ||||||||||||||| || | | ||||| || || ||||| || Sbjct 22488 CACTCGCATCATCATATGCTGAGGACGTTCGGCTACTCGACCATCGATGCGAAGAAGATA 22429 Query 156470 TGCGCGTTCCAGAGTTTTAAACCCGAAA 156497 || |||||||| ||||| || |||||| Sbjct 22428 TGAACGTTCCAGGGTTTTGAAGCCGAAA 22401 >seq201019 Length=96896 Score = 95.1 bits (104), Expect = 4e-14 Identities = 247/371 (67%), Gaps = 12/371 (3%) Strand=Plus/Plus Query 133292 GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATC 133351 ||||||||| ||||| ||||| ||| ||||| | ||||| ||||||||||||| Sbjct 29124 GAAGTTCAAGCTGCCGAGGCCCGGTGCTTCTATGGCTTCCAGATCATGATGGAAAATATC 29183 Query 133352 CATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCAC 133411 ||||| ||||| || || || || || ||||||||||| | || | ||| | Sbjct 29184 CATTCCGAGACATACTCCCTCCTCATCGACACCTACATCAAAGACCCAGT---GGAGCGC 29240 Query 133412 AAA---CTATTCAACGCCATT--AGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGG 133466 || || || | ||| || | | | |||| ||||| ||| ||| | ||||||| Sbjct 29241 GAATATCTTTTTGATGCCGTTGAAACCA--TTCCCTGTATCAAACGGAAGGCAGACTGGG 29298 Query 133467 CTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTG 133526 | | || ||||| ||||| | | | |||||| ||||| || || ||||| | Sbjct 29299 CCTTGAAGTGGATATCCGACAAAAGCTCCACTTTTGCAGAGCGTCTGGTCGCGTTTGCCG 29358 Query 133527 TAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGT 133585 || || || ||||| ||| || |||| ||| || || |||||| | |||||||| Sbjct 29359 CTGTTGAAGGGATTTTCTTCTCGGGCTCGTT-TGCGTCCATCTTTTGGATGAAAAAGCGA 29417 Query 133586 GGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCAC 133645 || | | || || || ||| || || || || || | || |||| | ||| Sbjct 29418 GGCCTGATGCCCGGCCTTACTTTCTCCAATGAGCTCATCAGCCGCGATGAGGGGATGCAC 29477 Query 133646 ACCGAATTTGC 133656 ||||| ||||| Sbjct 29478 ACCGACTTTGC 29488 >seq203459 Length=9064 Score = 93.3 bits (102), Expect = 1e-13 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 133508 CGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATT 133567 || || ||||||||||| | |||||||| |||||||||||||| ||| ||| | || Sbjct 4672 CGACTGGTTGCTTTTGCGGCCGTAGAGGGGATTTTTTTCAGTGGATTGTT-TGCGGTCTT 4614 Query 133568 -TTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTC 133626 |||||||| || ||||| || | | ||||| || ||| | |||||||| || | Sbjct 4613 CTTTTGGCTGAAGAAGCGCGGGCTGATGCCTGGGTTGGCATTTGCAAACGAACTCATAGC 4554 Query 133627 AAGGGACGAGGCACTTCACACCGAATTTGC 133656 |||| ||||| ||||||||| |||| || Sbjct 4553 CCGGGATGAGGCTCTTCACACCAAATTCGC 4524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1467961057055196