Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq204495 93.3 3e-14 >seq204495 Length=136544 Score = 93.3 bits (102), Expect = 3e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| || |||| |||| |||||| ||||||||||||||||| || |||| |||| Sbjct 14916 CAGGACAAGATGAAGGGTGGACTCCTTTTGAATGTTATAGTCCGAGAGCGTGCGTCCATC 14975 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || |||||||| |||||||| || || ||||| || || Sbjct 14976 TTCGAGTTGCTTGCCGGCGAAAATAAGACGTTGTTGATC 15014 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| |||||| || |||||||| ||||||| | |||| | || Sbjct 15200 AGGACGAGATGGAGGGTCGACTCCTTTTGGATGTTATAATCCGATAAGGTGCGACCGTCC 15259 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || |||||||| ||||||||||||| ||||| ||||| Sbjct 15260 TCAAGTTGCTTCCCGGCGAAGATCAAACGTTGTTGGTC 15297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324881029830452