Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq204495 87.8 1e-12 >seq204495 Length=136544 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| ||||| || || || || || || || | || || || Sbjct 14685 ACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTTCGTCC 14744 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || |||||||||||||| ||| | ||||| | ||||||||| || ||||| || || || Sbjct 14745 GTCCTCGAGTTGTTTGCCGGCAAAGATCAAGCGTTGCTGATCGGGAGGAATGCCTTCCTT 14804 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| ||| || | || | ||| || || ||| || || | || || Sbjct 14805 GTCTTGGATCTTTGCTTTCACGTTGTCGATAGTATCGGATGATTCGACCTCCAACGTGAT 14864 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | || || || || || ||||| Sbjct 14865 GGTCTTCCCGGTGAGCGTCTTCACGAAAATTTGCAT 14900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384259063775628