Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq204304 93.3 3e-13 >seq204304 Length=128263 Score = 93.3 bits (102), Expect = 3e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 282707 GGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAAT 282766 ||||| | ||| |||||| ||||| || ||||| || ||| | || | || | || Sbjct 52037 GGATTCATCGCAACTTGATTCTTGGCAGCGTCTCCGATAAGACGCTCATTATCGGAGAAA 52096 Query 282767 GAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA 282826 || || || || || ||||||||||| || ||||| || || ||||||||||| | | Sbjct 52097 GAGACGTAAGAGGGCGTTGTGCGATTTCCCTGATCGTTGGCGATAATTTCAACACGATCG 52156 Query 282827 TTTTGCCATACACCTACACAACTAAA 282852 | |||||| ||||| ||||| ||||| Sbjct 52157 TGTTGCCAGACACCGACACATCTAAA 52182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3730589921450808