Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq203715 102 2e-16 >seq203715 Length=28578 Score = 102 bits (112), Expect = 2e-16 Identities = 141/197 (72%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 110688 GTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGA 110747 |||||||||||| ||| | ||| ||| |||| ||| || |||||||||| || | | Sbjct 22834 GTTCCAATGTTACGAGCGTATGACGCCACAGCAAGATACGTTGATCAAGGTGGCAACAAA 22893 Query 110748 AAT---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTA 110804 | || | ||||||||||| ||||||| ||||| | || || ||||| ||||| Sbjct 22894 CGTCCGGGTGCTTTTGCTATCTACATCGAACCGTGGCACGCCGACATCTTTGACTTCTTG 22953 Query 110805 GAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATG 110864 || || || |||||||| || || ||| | || ||||| || |||||||| | Sbjct 22954 GATCTGCGCAAAAATCATGGCAAGGAGGAATCTCGTGCTCGTGACTTGTTTTATGCCCTT 23013 Query 110865 TGGATTTCAGATTTATT 110881 |||||| | ||||| || Sbjct 23014 TGGATTCCTGATTTGTT 23030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1183703043376188