Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq204124 96.9 3e-15 >seq204124 Length=22413 Score = 96.9 bits (106), Expect = 3e-15 Identities = 124/166 (75%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 47097 TTGCTGGGCATGAACGC-ACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCT 47155 ||| | ||||||||||| || || |||||| |||| ||||||||||| || ||||| || Sbjct 6870 TTGATTGGCATGAACGCGACCCTC-ATGTGCCAATACATTGAGTTTGTAGCTGATCGCCT 6928 Query 47156 GTTGGTGCAGCTCGGACAACCGAAATATTT-TAATGCTCGTAATCCGTTTGAGTTTATGA 47214 | |||| | | || |||| || | | |||| | ||||||||||| |||||| Sbjct 6929 GCTGGTCTCGTTGGG-CAACGATAAAGTGTATAATTCGACCAATCCGTTTGATTTTATGG 6987 Query 47215 ACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGT 47260 | | || |||||| | ||||| ||||| ||||||||||| || || Sbjct 6988 ATATGATATCGCTCCAAGGCAAGACCAACTTTTTCGAGAAGCGCGT 7033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475392814958880