Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq204495 93.3 4e-14 seq204124 82.4 7e-11 seq201019 82.4 7e-11 >seq204495 Length=136544 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | || || || || | ||||| || | |||||| | || |||||| | Sbjct 14901 CATGCAAATTTTCGTGAAGACGCTCACCGGGAAGACCATCACGTTGGAGGTCGAATCATC 14842 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 |||||||||||| | || ||| ||| || || || || || || || |||||||| Sbjct 14841 CGATACTATCGACAACGTGAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCA 14782 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 |||| | | || | | ||||||||||||||| || | ||| | | ||| ||||| Sbjct 14781 GCAACGCTTGATCTTTGCCGGCAAACAACTCGAGGACGGACGAACTCTTTCCGACTACAA 14722 Query 25354 TATTCAAAAAGAATCCACCATTCA 25377 ||| || || || ||||| |||| Sbjct 14721 TATCCAGAAGGAGTCCACTCTTCA 14698 >seq204124 Length=22413 Score = 82.4 bits (90), Expect = 7e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | ||| | ||| || || |||| | || ||||||||||| | |||||| Sbjct 6314 GCTCGACCAGATTCTCGTTGACAATCCCGTCAGAAGCGGCGAAAAAGGCTAAAACGTGAG 6255 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 || |||| ||||| |||||||| ||||| || ||||||| | || |||||| |||| Sbjct 6254 AAATAAAGTGGCGTTCGTTGTCGTTGAGTTTGTTTGTCCAGTCGTGAAGGTCCTTCGACA 6195 Query 110832 TGTCGATCTCTTC 110844 ||| || || || Sbjct 6194 AGTCCATTTCCTC 6182 >seq201019 Length=96896 Score = 82.4 bits (90), Expect = 7e-11 Identities = 116/161 (72%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 110728 GTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTTTAAGAAAGAAT--CGT 110785 ||| || ||| |||||| || || || |||||||||||||| ||| ||| || Sbjct 29096 GTTGACTATGCCGTCGGACGCCGCAAAGAAGGCGAGAACGTGGG--AGATGAAATGCCGC 29039 Query 110786 TCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACATGTCGATCTCTTCG 110845 || |||||||| | |||||||||||| | || |||||| || | ||| ||||| ||| Sbjct 29038 TCGTTGTCGTTTAAACGATTGTTCCAGTCGTGAAGGTCCTTTGAAAGGTCCATCTCCTCG 28979 Query 110846 ACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCA 110886 | ||||| || | |||| ||||||||| |||||| Sbjct 28978 GCGGTCCAGAACGAAGCCTCCGCTTTCTTGTACATTTGCCA 28938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443956582930560