Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq201019 210 3e-48 seq204124 183 4e-40 >seq201019 Length=96896 Score = 210 bits (232), Expect = 3e-48 Identities = 395/559 (71%), Gaps = 35/559 (6%) Strand=Plus/Plus Query 1455768 ACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAG 1455827 |||| | ||||||| |||||||| | |||| | ||||| || || ||||||||||||||| Sbjct 28927 ACCAACAGATATGGCAAATGTACAAGAAAG-CGGAGGCTTCGTTCTGGACCGCCGAGGAG 28985 Query 1455828 GTCGACCTCG----GCGCCGACACGGTCCACTGGGTG--TCGCTGAG-CGACGACGAGCG 1455880 | ||||| | || |||| ||||| ||| | | |||| ||||||| Sbjct 28986 ATGGACCTTTCAAAGGACCTTCACG----ACTGGAACAATCGTTTAAACGACAACGAGCG 29041 Query 1455881 CCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGA 1455940 ||||||||| ||||| |||||||| ||| || || ||| ||||| || ||||| Sbjct 29042 GCATTTCATCTCCCACGTTCTCGCCTTCTTT-GCGGCGTCCGACGGCATAGTCAACGAGA 29100 Query 1455941 ACCTGGCCGGCCGCTTTATGAAAGAGGTCCAAT-TGCCAGAGGCACGTTTGTTTTACGGG 1455999 || ||| | || || || || || ||| |||| ||||| || | || || || Sbjct 29101 ACTTGGTAGAACGTTTCTCTAATGAAGTTCAAGCTGCC-GAGGCCCGGTGCTTCTATGGC 29159 Query 1456000 TTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059 ||||||||| || ||||| ||||| || || || ||||| ||||| |||||||||||| Sbjct 29160 TTCCAGATCATGATGGAAAATATCCATTCCGAGACATACTCCCTCCTCATCGACACCTAC 29219 Query 1456060 GTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTG 1456119 |||| ||||| || ||| || | || ||| ||| | || || | || | || Sbjct 29220 ATCAAAGACCCAGTGGAGCGCGAATATCTTTTTGATGCCGTTGAAACCATTCC--CTGT- 29276 Query 1456120 AGGAAA---AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACT 1456173 | ||| ||||| |||||||| |||||||||| | |||| || ||| || | Sbjct 29277 ATCAAACGGAAGGCAGACTGGGCCTTGAAGTGGATATCCGACAA-AAG---CTCCAC-TT 29331 Query 1456174 TTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCT 1456232 |||| ||||| || |||| |||||||| || || || || || ||||||||| || | Sbjct 29332 TTGCAGAGCGTCTGGTCGCGTTTGCCGCTGTTGAAGGGATTTTCTTCTCGGGCTCGTT-T 29390 Query 1456233 GCG-CCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT-CTGCTTTAGCAACG 1456290 ||| ||||||||||| | || ||||| ||||| |||||||| ||| || || ||| | Sbjct 29391 GCGTCCATCTTTTGGATGAAAAAGCGAGGCCTGATGCCCGGCCTTACT--TTCTCCAATG 29448 Query 1456291 AATTTATCAGTCGCGACGA 1456309 | | ||||| ||||| || Sbjct 29449 AGCTCATCAGCCGCGATGA 29467 >seq204124 Length=22413 Score = 183 bits (202), Expect = 4e-40 Identities = 317/449 (71%), Gaps = 15/449 (3%) Strand=Plus/Plus Query 1455869 CGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCA 1455928 |||| |||| ||||| || || ||||| | ||||||| ||||||| || || | Sbjct 6232 CGACAACGAACGCCACTTTATTTCTCACGTTTTAGCCTTTT-TCGCCGCTTCTGACGGGA 6290 Query 1455929 TCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAA-TTGCCAGAGGCACGT 1455987 | || |||||| |||| || ||||| || || || ||| |||| |||||||| Sbjct 6291 TTGTCAACGAGAATCTGGTCGAGCGCTTCTCAAACGAAGTTCAAGCTGCC-GAGGCACGG 6349 Query 1455988 TTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTG 1456047 | || || || ||||| ||| || ||||||||||| || || || ||||||||||| Sbjct 6350 TGTTTCTATGGCTTCCAAATCATGATGGAAAACATCCATTCGGAGACATACTCGCTCCTC 6409 Query 1456048 ATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACG 1456107 ||||| || ||| |||||||||| | ||| || |||||||| ||| |||| || Sbjct 6410 ATCGATACGTACATCAAGGACCCAGCCGAACGCGAGTACCTCTTTGACGCTGTCGAGACC 6469 Query 1456108 GTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGC 1456164 | || | | | |||||||||||||| | || ||||| | |||| || Sbjct 6470 ATCCCATGCATCAAACGCAAGGCCGACTGGGCACTCAATTGGATATCCGACAAAGA---- 6525 Query 1456165 CTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGG 1456223 ||||||| || | || || ||||||| || ||||| || ||||||||||| || || | Sbjct 6526 CTCGACA-TTCGGAGAACGTCTCGTCGCTTTCGCCGCTGTTGAGGGCATCTTCTTTTCCG 6584 Query 1456224 GCAGTTTCTGCG-CCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTT 1456282 | | || |||| | || || ||| | |||||||| || | ||||| |||||| ||| Sbjct 6585 G-ATCTTTTGCGTCTATTTTCTGGATGAAGAAGCGTGGTTTGATGCCAGGTCTT-ACCTT 6642 Query 1456283 TAGCAACGAATTTATCAGTCGCGACGAAG 1456311 | |||||| || ||||| || ||||||| Sbjct 6643 TTCCAACGAGTTGATCAGCCGGGACGAAG 6671 Score = 98.7 bits (108), Expect = 1e-14 Identities = 136/185 (74%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 1456586 ATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGC 1456645 || ||||||||||| ||| ||||||||||| |||||||| ||| || || || ||||||| Sbjct 6873 ATTGGCATGAACGCGACC-CTCATGTGCCAATACATTGAGTTT-GTAGCTGATCGCCTGC 6930 Query 1456646 TCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAG 1456705 | | || | ||| || ||| || || |||| ||||| | ||||| Sbjct 6931 TGGTCTCGTTGGGCAACGATAAAGTG-TATAATTCGACCAATCCGTTTGATTTTATGGAT 6989 Query 1456706 TTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGCCAAG 1456764 |||| |||||| | ||||||||||||||||||||| |||||| | || ||| ||||| Sbjct 6990 ATGATATCGCTCCAAGGCAAGACCAACTTTTTCGAGAAGCGCGTGTCGGATTACTCCAAG 7049 Query 1456765 GCCGG 1456769 || || Sbjct 7050 GCTGG 7054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7158086027514296