Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq204124 201 9e-47 seq201019 201 9e-47 >seq204124 Length=22413 Score = 201 bits (222), Expect = 9e-47 Identities = 390/564 (69%), Gaps = 20/564 (4%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 |||||||| ||||| || ||||| | || || |||||||| ||||| ||| | || ||| Sbjct 6137 ATATGGCAGATGTATAAGAAAGCTGAAGCTTCGTTTTGGACTGCAGAGGAAATGGACTTG 6196 Query 43790 ACTAAAGACTTAGCAC-ATTGGATTGCATTAA---AACCACAA-GAAAAACATTTTATAT 43844 | || ||| | ||| | |||| | || ||| |||| ||| || ||||| | Sbjct 6197 TCGAAGGACCTT-CACGACTGGACAA-ACAAACTCAACGACAACGAACGCCACTTTATTT 6254 Query 43845 CTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTC 43904 || ||||| || ||||| || || |||||||| ||||| || ||| |||| | Sbjct 6255 CTCACGTTTTAGCCTTTTTCGCCGCTTCTGACGGGATTGTCAACGAGAATCTGGTCGAGC 6314 Query 43905 GGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCA 43964 | || | | ||||||||| | || ||||| ||||| ||||| || ||||| | Sbjct 6315 GCTTCTCAAACGAAGTTCAAGCTGCCGAGGCACGGTGTTTCTATGGCTTCCAAATCATGA 6374 Query 43965 TAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGG-- 44022 | ||||| || |||||||| | ||| || || || |||||||||||||| || Sbjct 6375 TGGAAAACATCCATTCGGAGACATACTCGCTCCTCATCGATACGTACATCAAGGACCCAG 6434 Query 44023 --GCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAA 44079 | ||| || | | | | ||| | || | || || | || ||| || |||| || Sbjct 6435 CCGAACGCGA-GTACC---TCTTTGACGCTGTCGAGACCATCCCATGC-ATCAAACGCAA 6489 Query 44080 AGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT---TTTGGAGAACGACTTGT 44136 || |||||||| || || |||||| || || || || |||||||| || || Sbjct 6490 GGCCGACTGGGCACTCAATTGGATATCCGACAAAGACTCGACATTCGGAGAACGTCTCGT 6549 Query 44137 CGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTT 44196 ||| || || | ||| || ||||| |||||||| ||||| |||||| | || || ||| | Sbjct 6550 CGCTTTCGCCGCTGTTGAGGGCATCTTCTTTTCCGGATCTTTTGCGTCTATTTTCTGGAT 6609 Query 44197 AAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGA 44256 ||||| || ||||||||||| || | || ||||| || ||||| || || || || || Sbjct 6610 GAAGAAGCGTGGTTTGATGCCAGGTCTTACCTTTTCCAACGAGTTGATCAGCCGGGACGA 6669 Query 44257 AGGCTTACATTGCGATTTTGCTTG 44280 |||| | || ||||||||||| Sbjct 6670 AGGCATGCACACGGATTTTGCTTG 6693 >seq201019 Length=96896 Score = 201 bits (222), Expect = 9e-47 Identities = 409/594 (69%), Gaps = 19/594 (3%) Strand=Plus/Plus Query 43701 TTGTCGTGTT-TCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||| ||||| | || |||| | || | ||||||||||||||||| ||||| |||| Sbjct 28905 TTGCCGTGTGCTGCAGTTCACGACCAACAGATATGGCAAATGTACAAGAAAGCGGAGGCT 28964 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTG--CA 43816 || || ||||| || || || | || | | || ||| | ||| | |||| | Sbjct 28965 TCGTTCTGGACCGCCGAGGAGATGGACCTTTCAAAGGACCTT-CACGACTGGAACAATCG 29023 Query 43817 TTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGA 43875 || |||| |||| || ||||| || || ||| | || || ||||| ||| ||| Sbjct 29024 TTTAAACGACAACGAGCGGCATTTCATCTCCCACGTTCTCGCCTTCTTTGCGGCGTCCGA 29083 Query 43876 CGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGC 43935 ||| |||||||| || || ||||| || || | | ||||||||| | || || Sbjct 29084 CGGCATAGTCAACGAGAACTTGGTAGAACGTTTCTCTAATGAAGTTCAAGCTGCCGAGGC 29143 Query 43936 ACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCT 43995 || || || ||||| || || || || |||||||| ||||| || | ||| || Sbjct 29144 CCGGTGCTTCTATGGCTTCCAGATCATGATGGAAAATATCCATTCCGAGACATACTCCCT 29203 Query 43996 TCTGATAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAATGCGA 44051 || || || || ||||||||||| || || ||| ||| | ||| |||| Sbjct 29204 CCTCATCGACACCTACATCAAAGACCCAGTGGAGCGCGAAT-ATC---TTTTTGATGCCG 29259 Query 44052 TAGAAAC-AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATT-C 44109 | ||||| | | |||| || |||| || |||||||||||| | || |||||| | Sbjct 29260 TTGAAACCATTCCCTGT-ATCAAACGGAAGGCAGACTGGGCCTTGAAGTGGATATCCGAC 29318 Query 44110 AAATGATTC--TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTT 44167 ||| | | | ||||| ||| || || ||||||||||| | ||| ||||| |||||||| Sbjct 29319 AAAAGCTCCACTTTTGCAGAGCGTCTGGTCGCGTTTGCCGCTGTTGAAGGGATTTTCTTC 29378 Query 44168 TCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACG 44227 || || ||||||||| |||| |||||| | || || ||||| ||||||| || | || Sbjct 29379 TCGGGCTCGTTTGCGTCCATCTTTTGGATGAAAAAGCGAGGCCTGATGCCCGGCCTTACT 29438 Query 44228 TTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGC 44281 || || |||||| | || || || ||||| || | || ||| ||||||||| Sbjct 29439 TTCTCCAATGAGCTCATCAGCCGCGATGAGGGGATGCACACCGACTTTGCTTGC 29492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396465364270540