Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq203754 86.0 5e-12 >seq203754 Length=64599 Score = 86.0 bits (94), Expect = 5e-12 Identities = 87/111 (78%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 27030 AACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCG 27088 ||||| | || | ||| | || || ||||||||||| || |||||||||| |||| | Sbjct 457 AACCGTAGGACGAGATGAAGAGTCGACTCTTTTTGAATGTTATAGTCGCTCAATGTTCGG 398 Query 27089 CTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | || || |||||||| || ||| |||||||||||||||| ||||| || Sbjct 397 C-CATCCTCAAGCTGTTTTCCCGCGAAAATGAGACGCTGTTGGTCCGGGGG 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423875275972896