Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq204124 129 7e-25 seq201019 109 7e-19 >seq204124 Length=22413 Score = 129 bits (142), Expect = 7e-25 Identities = 217/309 (70%), Gaps = 4/309 (1%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| ||| ||| | || ||||| ||| ||| | || || || ||| |||||| Sbjct 6690 GCAAAATCCGTGTGCATGCCTTCGTCCCGGCTGATCAACTCGTTGGAAAAGGTAAGACCT 6631 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| | ||| |||||||||| ||||||||| | | ||||| || || || |||||||| Sbjct 6630 GGCATCAAACCACGCTTCTTCATCCAGAAAATAGACGCAAAA-GATCCGGAAAAGAAGAT 6572 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-A 130193 ||||| ||| ||||| || | |||||| || | || | || | |||||| | | Sbjct 6571 GCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCGAATG-TCGAGTCTTTGTCGGATA 6513 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 130253 ||| || | ||||| | ||||| | ||| || |||| ||||| || || |||| Sbjct 6512 TCCAATTGAGTGCCCAGTCGGCCTTGCGTTTGATGCATGGGATGGTCTCGACAGCGTCAA 6453 Query 130254 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 130313 |||| | || ||| | ||| || ||||||||| |||| ||||| || ||||| | Sbjct 6452 AGAGGTACTCGCGTTCGGCTGGGTCCTTGATGTACGTATCGATGAGGAGCGAGTATGTCT 6393 Query 130314 CGCCATGGA 130322 | ||||| Sbjct 6392 CCGAATGGA 6384 >seq201019 Length=96896 Score = 109 bits (120), Expect = 7e-19 Identities = 342/521 (66%), Gaps = 9/521 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||||| || ||| |||||| ||||| ||||| || || Sbjct 29488 GCAAAGTCGGTGTGCATCCCCTCATCGCGGCTGATGAGCTCATTGGAGAAAGTAAGGCCG 29429 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| || || ||||| |||| ||| || || | ||| ||||| |||||||| ||| Sbjct 29428 GGCATCAGGCCTCGCTTTTTCATCCAAAAGATGGACGCAAACGAGCCCGAGAAGAAAATC 29369 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA- 130194 || || ||| || ||||| | |||||||| ||||| | | | | ||||| | | Sbjct 29368 CCTTCAACAGCGGCAAACGCGACCAGACGCTCTGCAAAAGTG-GAGCTTTTGTCGGATAT 29310 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254 |||||||| ||||| | ||||| | |||||| || | ||| | | || ||||| Sbjct 29309 CCACTTCAAGGCCCAGTCTGCCTTCCGTTTGATACAGGGAATGGTTTCAACGGCATCAAA 29250 Query 130255 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 130314 || | | || ||| ||||||||||| | || ||||| || ||||| || Sbjct 29249 AAGATATTCGCGCTCCACTGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTC 29190 Query 130315 GCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 130373 | ||||| ||| ||| || | ||| | | ||||| | || || ||| | Sbjct 29189 GGAATGGATATTTTCCATCAT-GATCTGGAAGCCATAGAAGCACCGGGCCTCGGCAGCTT 29131 Query 130374 GTACCTCATCTGCAAAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCA 130432 | || |||| | | || ||| | | ||||| || || || |||||| | ||| Sbjct 29130 GAACTTCAT-TAGAGAAACGTTCTACCAAGTTCTCGTTGACTATGCCGTCGGACGCCGCA 29072 Query 130433 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 130489 || || || || | | ||||| | | | || || ||||| | | | |||||| Sbjct 29071 AAGAAGGCGAGAACGTGGGAGATGAAATGCCGCTCGTTGTCGTTTAAACGATTGTTCCAG 29012 Query 130490 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||| ||| ||||| || || || | |||||| || ||||| Sbjct 29011 TCGTGAAGGTCCTTTGAAAGGTCCATCTCCTCGGCGGTCCA 28971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 616854263176480