Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq204124 93.3 5e-14 >seq204124 Length=22413 Score = 93.3 bits (102), Expect = 5e-14 Identities = 207/303 (68%), Gaps = 6/303 (2%) Strand=Plus/Plus Query 94656 GGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCT 94715 |||||||||| ||||| || | ||| || ||||| || || || | || Sbjct 6391 GGAGACATACTCGCTCCTCATCGATACGTACATCAAGGACCCAGCCGAACGCGAGTACCT 6450 Query 94716 CTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGT 94774 |||||| || || | || | || || || |||| | ||| | || ||||| | || | Sbjct 6451 CTTTGACGCTGTCGAGACCATCCCATGCAT-CAAACGCAAGGCCGACTGGGCACTCAATT 6509 Query 94775 GGTT-TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAG 94833 || | | |||||| | || | || | || || ||| |||| || || ||||||| Sbjct 6510 GGATATCCGACAAAGACTCGA-CATTCGGAGAACGTCTCGTCGCTTTCGCCGCTGTTGAG 6568 Query 94834 GGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 || |||||||| || || || || |||| |||||| ||| | |||||||| ||| | || Sbjct 6569 GGCATCTTCTTTTCCGGATCTTT-TGCGTCTATTTTCTGGATGAAGAAGCGTGGTTTGAT 6627 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952 ||||||||| ||| ||||||||| | ||| || ||||| || | ||| || || Sbjct 6628 GCCAGGTCTTACCTTTTCCAACGAGTTGATCAGCCGGGACGAAGGCATGCACACGGATTT 6687 Query 94953 TGC 94955 ||| Sbjct 6688 TGC 6690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581769781253920