Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq204124 143 3e-29 >seq204124 Length=22413 Score = 143 bits (158), Expect = 3e-29 Identities = 352/525 (67%), Gaps = 14/525 (3%) Strand=Plus/Minus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| ||| ||| |||||| || | ||| ||||| || || ||||| | ||| || Sbjct 6690 GCAAAATCCGTGTGCATGCCTTCGTCCCGGCTGATCAACTCGTTGGAAAAGGTAAGACCT 6631 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGG-CACAGAAGGAACCACTGAAGAAGAT 74869 ||||| | ||||||||||||| ||| || || | | || ||| | || |||||||| Sbjct 6630 GGCATCAAACCACGCTTCTTCATCCAGAAAATAGACGCAAAAG-ATCCGGAAAAGAAGAT 6572 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA---CGGTGCATCGGAAGTCAT 74926 ||| || ||| || || ||||| || |||| |||| || | | | | || Sbjct 6571 GCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCGAATGTCGAGTCTTTGTCGGATAT 6512 Query 74927 CCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGA 74985 |||| | | ||||| || || || ||||||| ||| |||| || |||| || | | Sbjct 6511 CCAATTGAGTGCCCAGTCGGCCTTGCGTTTGA-TGCATGGGATGGTCTCGACAGCGTCAA 6453 Query 74986 AGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGT 75043 ||||| || || | || | || ||||||| | | | || || | || ||||| || Sbjct 6452 AGAGGTACTCGCGT--TCGGCTGGGTCCTTGATGTACGTATCGATGAGGAGCGAGTATGT 6395 Query 75044 CTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAAT 75103 ||||||||| || || | | ||| | | |||||| |||| ||||| ||| Sbjct 6394 CTCCGAATGGATGTTTTCCATCATGATTTGGAAGCCATAGAAACACCGTGCCTCGGCAGC 6335 Query 75104 CTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGC 75163 || || || ||||| || | | | | |||||| |||| || ||||| || ||||| Sbjct 6334 TTGAACTTCGTTTGAGAAGCGCTCGACCAGATTCTCGTTGACAATCCCGTCAGAAGCGGC 6275 Query 75164 GAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGT---CCCA 75220 |||||| || | || ||||||||||| || | ||| ||||||||| ||| Sbjct 6274 GAAAAAGGCTAAAACGTGAGAAATAAAGTGGCGTTCGTTGTCGTTGAGTTTGTTTGTCCA 6215 Query 75221 ATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || | |||||| || ||| || || ||||| | ||||| || Sbjct 6214 GTCGTGAAGGTCCTTCGACAAGTCCATTTCCTCTGCAGTCCAAAA 6170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545817124378400