Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq204495 109 5e-19 seq204496 84.2 2e-11 >seq204495 Length=136544 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || || ||||| ||| | || || | || || ||| | || Sbjct 14901 CATGCAAATTTTCGTGAAGACGCTCACCGGGAAGACCATCACGTTGGAGGTCGAATCATC 14842 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || ||| ||| || |||||||| |||||||| || |||||||| Sbjct 14841 CGATACTATCGACAACGTGAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCA 14782 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || || || || | |||||||||||| | || ||| | || ||||||| ||||| Sbjct 14781 GCAACGCTTGATCTTTGCCGGCAAACAACTCGAGGACGGACGAACTCTTTCCGACTACAA 14722 Query 27167 CATTCAAAAGGAGTCGAC 27184 || || |||||||| || Sbjct 14721 TATCCAGAAGGAGTCCAC 14704 Score = 86.0 bits (94), Expect = 5e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 27091 GCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGA 27150 |||| || || || ||||| ||||| || | |||||| || ||| | || ||| || | Sbjct 15308 GCATCCCCCCGGACCAACAACGTTTGATCTTCGCCGGGAAGCAACTTGAGGACGGTCGCA 15249 Query 27151 CCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGG 27210 || | || ||||| ||||| ||||||||||||||| | ||| | || | ||| |||| | Sbjct 15248 CCTTATCGGATTATAACATCCAAAAGGAGTCGACCCTCCATCTCGTCCTTCGTCTGCGTG 15189 Query 27211 GTGGCAT 27217 | ||||| Sbjct 15188 GAGGCAT 15182 >seq204496 Length=81202 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 27091 GCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGA 27150 |||| |||||||| ||||||||| | || | ||| ||||| ||| |||| || || | Sbjct 37448 GCATCCCACCCGACCAACAGCGTCTCATCTTCGCGGGCAAGCAACTGGAGGATGGTCGCA 37389 Query 27151 CCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGG 27210 | | ||| || |||||||||||||||||||| | |||||||| | ||| | || | Sbjct 37388 CTTTGAGCGACTATAACATTCAAAAGGAGTCGACTCTTCATTTGGTGCTTCGTCTCCGTG 37329 Query 27211 GTGG 27214 |||| Sbjct 37328 GTGG 37325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433837583463644