Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq204495 87.8 1e-12 >seq204495 Length=136544 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| ||||| || || || ||||| || || | || |||||| || Sbjct 14900 ATGCAAATTTTCGTGAAGACGCTCACCGGGAAGACCATCACGTTGGAGGTCGAATCATCC 14841 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | || || |||| || ||| ||| || ||||| ||||| |||| || | Sbjct 14840 GATACTATCGACAA--CGTGAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCCGATC 14783 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||||| || || |||||||| |||||| | || |||| ||| | | ||||| |||| Sbjct 14782 AGCAACGCTTGATCTTTGCCGGCAAACAACTCGAGGACGGACGAACTCTTTCCGACTACA 14723 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | ||||| || ||| |||| | || | || | ||| | |||||||| Sbjct 14722 ATATCCAGAAGGAGTCCACTCTTCACCTCGTCCTCCGTCTCCGTGGCGG 14674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354975433874916