Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq204495 104 2e-17 >seq204495 Length=136544 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || || ||||| || || || ||||| | || || || || | Sbjct 14900 ATGCAAATTTTCGTGAAGACGCTCACCGGGAAGACCATCACGTTGGAGGTCGAATCATCC 14841 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| | || | | ||| ||| || ||||| ||||| | || || ||||| Sbjct 14840 GATACTATCGACAACGTGAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAG 14781 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || ||||||||||||||||| || |||| ||| ||| | ||| ||||| Sbjct 14780 CAACGCTTGATCTTTGCCGGCAAACAACTCGAGGACGGACGAACTCTTTCCGACTACAAT 14721 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 14720 ATCCAGAAGGAGTCCAC 14704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337167130930064