Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq203715 84.2 3e-11 >seq203715 Length=28578 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966 ||||| | ||| | ||||| || || || ||||| || || ||||| || ||| Sbjct 22682 GCACAACTTTTAAGAGTGTCGTAAATTCCTTCTATCGAGTCGTCTTTCATGCAAACAAGG 22623 Query 76967 AAACAGCTAGA-CATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 || || | || |||||| |||| ||||| ||||| || | || || || ||||| Sbjct 22622 AAGCA-CGAGCTCATTTGGGGATGGGGTGTTCCGGCATTGAAAAGGGTTGGTGAAGCATG 22564 Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085 |||||| | ||| || | || ||||| || |||| || ||||| || || Sbjct 22563 AGTGAAGAACCGTTCCGACATGAGGTTGTAGGTCTCAACCACGCGTTCTAGGTCGGATCC 22504 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 || || || ||||| || ||||||| |||||||||||| ||||| Sbjct 22503 GTGTATACCGACAGCCACTCGCATCATCATATGCTGAGGACGTTC 22459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711111890146560