Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq204495 147 2e-30 >seq204495 Length=136544 Score = 147 bits (162), Expect = 2e-30 Identities = 163/213 (77%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186 || |||||||| ||| |||||| ||||| ||||| |||| ||||| || |||| | Sbjct 14692 ACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTT--CGTCCGTCCT 14749 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | || || || |||||||||||||| || |||||||| | ||| | |||||||| || Sbjct 14750 CGAGTTGTTTGCCGGCAAAGATCAAGCGTTGCTGATCGGGAGGAATGCCTTCCTTGTCTT 14809 Query 44247 TTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||||| | ||| | || || |||| ||||| ||||||| ||| || ||| Sbjct 14810 GGATCTT-TGCTTTCACGTTGTCGATAGTATCGGATGATTCGACCTCCAACGTGATGGTC 14868 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||| ||||||||||| ||||||||| Sbjct 14869 TTCCCGGTGAGCGTCTTCACGAAAATTTGCATG 14901 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || || |||||||| ||||||||||| | ||||||||||| | || | || ||||| Sbjct 14518 TCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTG 14577 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 ||| |||||| ||||| | | |||||||| | || || ||||||| || || Sbjct 14578 TCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGACGACTCTACCTCCAAGGTGATG 14637 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || | |||||||| || || ||||| Sbjct 14638 GTCTTGCCTGTCAACGTCTTCACAAAAATCTGCAT 14672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359093145077436