Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq53 113 1e-19 >seq53 Length=44312 Score = 113 bits (124), Expect = 1e-19 Identities = 301/455 (66%), Gaps = 15/455 (3%) Strand=Plus/Plus Query 319579 TGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGA 319638 |||||||||||||| || || ||||| | | || || | |||| ||||| || || Sbjct 22406 TGGTTGGTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGGGCCAGG 22465 Query 319639 GCGAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATA 319698 ||||| ||||| ||||| || || || || | |||| ||| ||| || |||| Sbjct 22466 GCGAGCTTCATCTTCCAACCACCCGAGAGGGCCGTAATGGGGCCAGCCTGACGCTGCTCG 22525 Query 319699 TCAAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTT 319758 |||||||| | | | || || | || | | || || | | | | || Sbjct 22526 TCAAAGCCCATCTCACCCAGGGTCTTGGCGGCCGTCTCGCG-GTCGACGT----TCAGGC 22580 Query 319759 ACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGA 319818 ||||| | | ||| || ||||| | || | ||| | || || |||||||| Sbjct 22581 GCTTGTCCTGC--TGG--ATAAAGTCCAGAATGGAAATGTCACCCTCCGAGCCGTCGAGG 22636 Query 319819 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCG 319878 ||||| || ||||| || || | || | |||||||| || || | ||||||| Sbjct 22637 TCGTGCTCGACGTACCAGGTGCGCACCTCCTCGGGCGAGGGGAAGCCCTCGACCTGGCCG 22696 Query 319879 TTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 319938 ||| || |||||||||||||| || ||||| | ||||| | ||||| ||||||||| Sbjct 22697 TTCTGGATGGCGCGCATCAGGGTCGACTTACCGGAACCGTTACGACCACAGAGACCGTAG 22756 Query 319939 CGGTTTCCGCGTTTCAGGTTGAACCGCGTG---TTGTTCAGAAGAATTTTTCCACCATAT 319995 |||| || || || || | | ||| ||||||| ||||| || |||| || Sbjct 22757 CGGTGGCCACGCTTGAG---ACGCAGGGTGGCAGTGTTCAGCAGAATCTTGGCACCGTAG 22813 Query 319996 GCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||| || || | ||| | |||||| ||||| || Sbjct 22814 GCCAGCGAGAACTGACAGTTACACAGGTCCTCGCC 22848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057820896278270