Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8 123 3e-23 >seq8 Length=40485 Score = 123 bits (136), Expect = 3e-23 Identities = 263/390 (67%), Gaps = 2/390 (1%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||| || ||||| || || | || || ||||| || || ||| Sbjct 5215 CCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCAGGCATGAGACCGCGCTTC 5156 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | |||||| || | ||| ||||| || || || || || |||||||||| ||||| Sbjct 5155 TTGAGCCAAAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 5096 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTC 17163 |||| | || || | | ||| ||| |||| ||| ||||| | ||||||| Sbjct 5095 GCGACCAGGCGCTCCGAGAACGAGGCGCGCTTGTC-CGAGATCCAGCGCAAGGCCCACTC 5037 Query 17164 GGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTG 17223 ||| || ||||| | | | || || || ||||| ||||| | | || | || Sbjct 5036 GGCCTTCTGCTTGACGACAGGGATGGTCTCGATGGCGTTAAAGAGGTATTCGCGCTGCTC 4977 Query 17224 TAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCAT 17283 || || ||||| || ||||| || |||| | || ||||| ||||||||||| Sbjct 4976 CGACTCACGGATGTACGTGTCAATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCAT 4917 Query 17284 GGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCG 17343 |||||||| ||||| ||||| ||||| || || || || || || ||| || Sbjct 4916 CATAATCTGAAAGCCGTAGAAGCAGCGGGCCTCAGCGGCCTGCACCTCGGCGCTGAAGCG 4857 Query 17344 TTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 ||| | || || ||||| ||||||||||| Sbjct 4856 CTCCACCAGGTTCTCGTTGACGATGCCGTC 4827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544118525720