Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq201 104 3e-17 >seq201 Length=59906 Score = 104 bits (114), Expect = 3e-17 Identities = 392/617 (64%), Gaps = 41/617 (7%) Strand=Plus/Plus Query 145687 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGC 145746 |||||||| || | | |||||| || ||||| |||| ||| | |||| ||| ||| | Sbjct 9327 GGCTCCACATGATCCAAGTAGACATGAGCGTCGCCCATCACGAGCGTGAATTCCTCGGCC 9386 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 | || || | || | | || ||||| || | ||||| || |||||||| Sbjct 9387 GTGCACCCTGTCACAGCCGCAATAAAGTGCGTCAGAAGAGCATAGCTTGCAATGTTGAAC 9446 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGC--------- 145857 ||||| ||||| || | ||| | ||| || ||||||| |||||| || || Sbjct 9447 GGCACACCCAGGCCGAGGTCGCACGAACGTTGGTACATCTGGCAAGAAAGACGCGGCTTG 9506 Query 145858 --TCCCCGCCC-------GCC---------------ACGTAGAACTGGCACAGGAGGTGG 145893 |||| | | ||| ||| |||| ||||| || | || Sbjct 9507 GTTCCCTGTGCCTTTTCTGCCTCCGTCGGAAGCGATACGAAGAATTGGCAGAGAATATGA 9566 Query 145894 CAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTC 145953 ||||| ||||||||||| || || || || ||||| ||| | || | || | Sbjct 9567 CAGGGTGGCAGGGCCATAATATCAAGATCAGCGGGATTCCATGCGCTCAGCAGGATGCGG 9626 Query 145954 CTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGC 146013 | | | |||||| ||||||| | | | || | | | |||||| || |||||||| Sbjct 9627 CGGTCCGTAGGGTTCGTCTTGATTTGCTCAATGATATGCGCGAGCTGATCGACGCCCTGG 9686 Query 146014 CCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCG 146073 ||| ||||||| || | | | |||||| || || ||||| | ||||||||| || Sbjct 9687 CCCTGGTAATCCGTGTCCGCATTCACGTATTTCGCGCCAAAGTGGCGCCACTGGAAGCCA 9746 Query 146074 TAGACGGGCCCCAGGTCCCCGGGCTC---CCTGTGCCCCAG-CCCGGCCCGGGCGAGGAA 146129 || || || || |||||||| ||| | ||| || || || | || ||||| Sbjct 9747 TACACTGGACCTAGGTCCCC---CTCACGGCGGTGACCAAGTCCTCGTTTCTGC-AGGAA 9802 Query 146130 GTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTC 146189 || || || ||| | ||||| || | |||| | | |||| |||||||| Sbjct 9803 ATCGGAAGAGCCATTGCCATCCCAAATGTGGACGTTGCGTTCACTGAGCCACTTGGAGTC 9862 Query 146190 CGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTT 146249 |||| || |||||||||||||| |||||| || || || | | || || | || Sbjct 9863 CGTGCGTCCTGCGATGAACCAGAGCAACTCTTCCAGCACACCACGATAAAATACACGTTT 9922 Query 146250 GGTGGTCAGCAGGGGGA 146266 || |||| ||||||| Sbjct 9923 TGTTGTCAAAAGGGGGA 9939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075110905160