Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq8 535 4e-147 seq105 149 6e-31 seq102 145 8e-30 seq27 127 2e-24 >seq8 Length=40485 Score = 535 bits (592), Expect = 4e-147 Identities = 639/853 (75%), Gaps = 17/853 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| |||||| || |||||| | ||||| || | |||| || Sbjct 4620 GAGCCGCTGCTGAAGGAGAACAAGTCGCGTTTCGTGCTCTTCCCGATCCGCTACCACGAG 4679 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||||||||||||||||| ||||||| |||||||| Sbjct 4680 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGATGGACCTG 4739 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | ||||||||| | || |||||||||| |||||||| || | | Sbjct 4740 TCGAAGGACCTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTAAGC 4799 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || |||||||| || || ||| |||||||||||||||||||| ||||| ||||| Sbjct 4800 CATGTCCTGGCCTTCTTTGCTGCCTCAGACGGCATCGTCAACGAGAACCTGGTGGAGCGC 4859 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| || ||||| || |||||||||||||||||||| || Sbjct 4860 TTCAGCGCCG-AGGTGCAGGCCGCTGAGGCCCGCTGCTTCTACGGCTTTCAGATTATGAT 4918 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||| | ||| ||| |||||| ||||||||| | || ||||| Sbjct 4919 GGAGAACATCCACTCGGAGACGTACTCGCTCCTCATTGACACGTACATCCGTGAGTCGGA 4978 Query 116932 GGAGAAGC---TCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | || || | | | | | |||||||||||||| || || |||||| ||||||| Sbjct 4979 GCAGC-GCGAATACCTCTTT--AACGCCATCGAGACCATCCCTGTCGTCAAGCAGAAGGC 5035 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGG 117047 ||||||||| ||||||||||| | | || || | ||| | ||| ||||||||||| | Sbjct 5036 CGAGTGGGCCTTGCGCTGGATCTCGGACA-AGCGCGCCTCGTTCTCGGAGCGCCTGGTCG 5094 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 |||| || |||||||||||| |||| || |||||| || ||| |||| |||||||||| Sbjct 5095 CCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTTTGGCTCA 5154 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| ||||| |||||||| |||||| | ||| |||||||||||||| | ||||||| Sbjct 5155 AGAAGCGCGGTCTCATGCCTGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACGAGG 5214 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCG 117226 ||||||| |||||||||||| | |||||| || || | |||| || | | || Sbjct 5215 GTCTGCACACCGACTTTGCCTGCCTCTTGTTCAGCCACCTGAAGAAGCGCGCGCACCCCG 5274 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | || || | ||| ||||||| || || ||||| |||||| ||| | ||||| Sbjct 5275 ACACG-GTGAACCGCATCATCACCGAGGCCGTGGCCATTGAGCAGGACTTTTTGACCGAC 5333 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTT 117345 || ||||| || ||| | || | || ||| | |||| || ||||| ||||| Sbjct 5334 GCCCTGCCCGTCTCGCTGATCGGCATGAA-CGCGCGCCTCATGTGCCAGTACATTGAGTT 5392 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405 || |||||| | |||||| || | || | | | |||||||||||||| || | ||||| Sbjct 5393 TGTGGCCGACCGCCTGCTGGTCAACCTCGGCAACCCCAAGCACTACAACTCGGCGAACCC 5452 Query 117406 GCTGGACTTTATG 117418 | ||||||||| Sbjct 5453 CTTTGACTTTATG 5465 >seq105 Length=229645 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || || || || || |||||| | || || || | || Sbjct 227086 ATGCAAGTGTTCGTCAAGACCCTGACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 227145 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| |||||| ||||||| Sbjct 227146 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 227205 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||||||||| |||||||| || | |||||||| | |||||||||| Sbjct 227206 CAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACAAC 227265 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| ||||||||| || ||| ||||| || | || || Sbjct 227266 ATCCAGAAGGAGAGCACGCTGCACCTCGTGCTGCGCCTGCGTGGTGG 227312 >seq102 Length=51898 Score = 145 bits (160), Expect = 8e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || ||||| || ||||| ||||| || || ||| |||| || ||| | | Sbjct 8796 AATGCAAATTTTTGTAAAGACCCTCACTGGCAAGACGATTACCCTCGAGGTGGAATCGTC 8855 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | |||| |||||| || |||| ||||| ||||| || || |||||| Sbjct 8856 GGACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACC 8914 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || || |||| || || || |||||||| || | || || || | |||||||| Sbjct 8915 AACAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTGAGCGACTACA 8974 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||||| |||||||||||| ||| |||| Sbjct 8975 ACATCCAGAAGGAGAGCACGCTGCATCTCGTGCTGCG 9011 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || || || |||| || ||| | | Sbjct 9025 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACGATTCCCCTCGAGGTGGAATCGTCG 9084 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||||| || |||| ||||| |||||||| || ||||||| Sbjct 9085 GACACGATTGACAATG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCA 9143 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || || || |||||||| || | || || || | ||||||||| Sbjct 9144 ACAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTGAGCGACTACAA 9203 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| ||||||||||| ||| ||||| || | || ||| Sbjct 9204 CATCCAGAAGGAGAGTACGCTGCATCTCGTGCTGCGCCTGCGTGGTGGC 9252 >seq27 Length=62815 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || |||||| | || ||||| | | Sbjct 53090 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACCCTTGAGGTCGAGTCTTCG 53031 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | || || |||||||| || ||||||| Sbjct 53030 GACACGATCGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCAA 52971 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | ||| || || ||||| || |||| |||||||| | |||||||||| Sbjct 52970 CAGCGTCTGATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGAGCGACTACAAC 52911 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| ||| ||||| || ||| Sbjct 52910 ATCCAGAAGGAGAGCACCCTGCACCTCGTG 52881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217725185040