Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20caprae_20[genbank_20GCA_5F001264625.1_202015-08-11] 229 sequences; 7,580,816 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq14 331 8e-86 seq8 232 6e-56 seq102 111 1e-19 seq27 107 2e-18 >seq14 Length=25249 Score = 331 bits (366), Expect = 8e-86 Identities = 648/948 (68%), Gaps = 16/948 (2%) Strand=Plus/Minus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 || ||||| || || ||||| || ||| |||||| || ||||||| | ||| || Sbjct 7196 GCAATCGACGCCAGGTTGCACACAGCCGTCTCGTCCGGCGAGCTGTACTCGATAATCTCC 7137 Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCAC 23140 || || || || | ||| |||||||||| || |||||||||| || || || | Sbjct 7136 GTGCACAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTCGCC 7077 Query 23141 GAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGC 23200 || |||||||| || | | | || |||||||||||| ||| | ||||| || || | Sbjct 7076 GAGTCCTTGTACAGGACGAAGGGGTTGCCCGTCTCGATCTGTGCCTCGAGAATGGCATAC 7017 Query 23201 CACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTAC 23260 |||| |||| || | ||| ||| | | ||| || |||||| || | ||| Sbjct 7016 CACAGCTTCTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTATTTCTCGTAG 6957 Query 23261 AACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATG 23320 | || |||||||| | || || ||||||||||||||||| | | || ||||| Sbjct 6956 AGAGCATCAAATTCTTCGCCATAGCAGTCGGCCAGGCCGGGGCACTCGGCGGGGCACATC 6897 Query 23321 AGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCG 23380 || ||| || | || ||||| | ||| || | || || ||||| || || Sbjct 6896 AGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGAACAAGTCAGGAATCCACAGCGCC 6837 Query 23381 TAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAG 23440 |||||| ||||| |||||||||||||| || ||| ||| || || ||| | || Sbjct 6836 AGGAACAGGTCGCGCGCGCGCACCTCCTCCTTACCGTGGTTTTTGCGCAGATCAATGAAC 6777 Query 23441 TCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTG 23500 || |||||||||| ||||||||||| ||||| | |||||| || || || | ||| ||| Sbjct 6776 TCGAACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGACGCTTGTTG 6717 Query 23501 CCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCG 23560 || ||||| || ||||| || || ||||||||||| || | ||||| ||||| | |||| Sbjct 6716 CCACCCTGGTCCACGTAGCGCGCTGTGTTGTTGTATACGCGGAGCATGGGCACAATACCG 6657 Query 23561 TTGGACGCGCC--GCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGT 23618 ||| | |||| | || || || | ||| || |||| || | |||||| | | Sbjct 6656 TTGCTCACGCCATTCGTA--CCGGCAATGTACGAGCCCGTTGCACGGATGTTGTGGATAT 6599 Query 23619 GGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGA 23678 | ||| || || ||| ||| || ||||||||||| || || |||||||||| Sbjct 6598 TCAGACCAATACCACCGGCCGTCTTGCTGATCATCGCGCACGTCTTGAGCGTGTCGTAGA 6539 Query 23679 TGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGG 23738 | |||||||| ||| || || | || | ||| || || |||||||| | |||| Sbjct 6538 TACCCTCGATAGAGTCGTCCTTCATGCTCACAAGGAAGCAGGACGACATTTGGGGGTTGG 6479 Query 23739 GCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCAT-TC-GACAT-TA 23795 |||| | || |||||| ||||| ||||| |||||| || | || ||||| || Sbjct 6478 GCGTGCCAGCATTGAACAGGGTCGGCGACGCGTGTGTAAAG--GCCTTCTCGGACATGTA 6421 Query 23796 GATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCA 23855 | ||||| || || |||||| | | ||||| ||||| || || | ||||| |||| Sbjct 6420 G-TTGTATGTCTCAATGGCGCTCTTCACATCCTCGCCGTGGATGCCCACAGCGACACGCA 6362 Query 23856 TCATCATGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAAC 23912 | | ||||| || || | || ||||| | ||| || || | ||| || || | Sbjct 6361 TGAGCATGTGCTGGGGGCGCTCCGCGACCTT---GCCATTGATGCGCAGCAGGTAGGAGC 6305 Query 23913 GTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 | | || ||| || || || ||| ||| |||| |||||| || |||| Sbjct 6304 GCTCCAGCGTCTTGAAGCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGT 6257 Score = 199 bits (220), Expect = 4e-46 Identities = 521/783 (67%), Gaps = 15/783 (2%) Strand=Plus/Minus Query 22101 CGGTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACA 22160 ||| | ||||||| || ||||| || || | || || || ||||| | || ||| Sbjct 8122 CGGCCGTGTCCACGGTGAACTGGATCGCCTGCGCAGCAGGACGCGTGCGCAAGTAGTACG 8063 Query 22161 TGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAAC 22220 ||||||||| || ||| ||||||| ||||||| || |||||||| | | ||| | Sbjct 8062 AGCCCGTCTTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGACCAAAGG 8003 Query 22221 TCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGG 22280 ||||| | || || | |||| || ||||| | |||||| || || || | Sbjct 8002 TCGGCGCGCTCAGGTGAATGTTGAGGCTTTGGCTCTGGCACACAAACGCGCCACGGTCCG 7943 Query 22281 CGGCCATATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCCT 22338 | ||||| | || ||| || | | | || ||||| || |||||||| || | | Sbjct 7942 CAGCCATGTCAAT-AATC-ACCTTTTGGCTAATCTCCCACACCGTCTTGTAGAGGGCCTT 7885 Query 22339 GATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT 22398 ||| | || || | || |||||| || ||| | || ||| | Sbjct 7884 GATGTGGTCGGGAATGCCAGCAATGTTCTGGATCGAGCCGCCGTGCGCAATAATCTTTTG 7825 Query 22399 TTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCAC 22458 || |||| |||||||| | ||| | || | || | ||| |||| || Sbjct 7824 CTTCATCGAGTCGTTCCAGAGACCCAGCTCGACAAGCTCGCGCAGCAGCCACGGGTTGAC 7765 Query 22459 CACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAA 22518 ||| || |||||||| | || || ||||| |||||||||| ||| |||| || || Sbjct 7764 CACCTGGAACTCGCCCGCCAGTACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAA 7705 Query 22519 AGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAG 22578 | || ||| || || ||||| || || || |||||||||||||||| ||| || Sbjct 7704 GCACTCGTTGAAGCCGAGGATCTGGCTCGTGGAGGCCGTCGGCATCGGCGCCATCAGCAG 7645 Query 22579 CGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATC 22638 |||||| | || ||||||| | ||| | ||||||| | | |||||||||||| || Sbjct 7644 CGAGTTCCGCAGACCGTGCTGGGCAATCTGCGCCTTGAGCGTGGCCCAGTCCCACAGGTC 7585 Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTG 22696 | ||||| || ||||| ||||| |||| | ||| |||| || |||||| Sbjct 7584 CGTCGGCG---GGCGGTTCCACAGGTCGTACTGCAGGAGGCCCTGCGA--GGCGGGGCTG 7530 Query 22697 CCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCG 22756 || |||||||| |||||||| |||||| || || || |||||||| ||||| || Sbjct 7529 CCCTCGTACGTCTCGTACGGGCCATATTCGGCAGCCAGCTCGCAGCTGCGCTCCAGGGCC 7470 Query 22757 CCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGCTTTCGTA 22815 | | || || ||||||||||||| | |||| | |||| || | ||| ||| | Sbjct 7469 GCATGGTAGATGGTCTCGAAGATTTGCACGTTC-AGCAGGCGCGCCTCCTGGCTGTCGAA 7411 Query 22816 CGGCATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874 ||| ||| | ||| |||| |||||| || || | |||||| || || ||||| || || | Sbjct 7410 CGG-ATAGCCCATGATCATGAACGCATCGGCAAGACCCTGGACACCGATACCAATGGGCC 7352 Query 22875 GGT 22877 ||| Sbjct 7351 GGT 7349 >seq8 Length=40485 Score = 232 bits (256), Expect = 6e-56 Identities = 567/847 (67%), Gaps = 43/847 (5%) Strand=Plus/Plus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || || ||| | |||||||| ||||| || || ||||| ||||||| ||| || | ||| Sbjct 4677 GAGATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGATGGAC 4736 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCA---AAGAATCTGAGAGAAATTTTATT 57683 ||||| ||||| ||| ||| ||||| || || | || |||| | | ||| | Sbjct 4737 CTGTCGAAGGACCTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTA 4796 Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743 | || || |||| || || || || || || || || || |||||||| |||| || Sbjct 4797 AGCCATGTCCTGGCCTTCTTTGCTGCCTCAGACGGCATCGTCAACGAGAACCTGGTGGAG 4856 Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803 | || || ||||| | | ||||| | ||||| ||||| ||||| | Sbjct 4857 CGCTTCAGCGCCGAGGTGCAGGCCGCTGAGGCCCGCTGCTTCTACGGCTTTCAGATTATG 4916 Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTAC----GTGAA--G 57857 || || ||| | || || || | ||| ||||| ||||| || |||||| |||| | Sbjct 4917 ATGGAGAACATCCACTCGGAGACGTACTCGCTCCTCATTGACACGTACATCCGTGAGTCG 4976 Query 57858 GA-CAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAA 57916 || || || ||| | || || || ||||| ||||| || || || | ||| ||| Sbjct 4977 GAGCAGCG-CGA-ATAC-----CTCTTTAACGCCATCGAGACCATCCCTG---TCGTCAA 5026 Query 57917 G---AAGGCAGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCG 57969 | ||||| |||||| | | ||||| | |||||| ||| ||||| | | Sbjct 5027 GCAGAAGGCCGAGTGGGCCTTGCGCTGGATCTCGGACAAGCGC----GCCTCGTTCTCGG 5082 Query 57970 AGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAA 58029 || | || |||| || ||||||||||| || || || || |||||| ||||| | | Sbjct 5083 AGCGCCTGGTCGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCA 5142 Query 58030 TATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATAT 58089 | |||||| | ||||| ||||| || ||||| |||||| |||| |||||| | || | Sbjct 5143 TCTTTTGGCTCAAGAAGCGCGGTCTCATGCCTGGCCTGTCGTTCTCGAACGAGCTCATCT 5202 Query 58090 CGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATA 58149 |||| ||||||||||| || || || ||||| ||||| ||| | ||| | || | Sbjct 5203 CGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTCTTGTTCAGCCAC---CTGAAGA 5259 Query 58150 AACCGACGCGGGATCGCATCTTGGA---CATTATCACCGAGGCGGTCGCGATCGAAAATG 58206 | | ||| || || | ||| ||||||||||| || || || || | | Sbjct 5260 AGCGCGCGCACCCCGACACGGTGAACCGCATCATCACCGAGGCCGTGGCCATTGAGCAGG 5319 Query 58207 AGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAA 58266 | ||| | ||||| ||||| || || | || |||| |||||| | |||| Sbjct 5320 ACTTTTTGACCGACGCCCTGCCCGTCTCGCTGATCGGCATGAACGCGCGCCTCATGTGCC 5379 Query 58267 AGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGC---GTCATT 58323 |||||||||||||||| |||||| | || || || ||| | || | | || | Sbjct 5380 AGTACATTGAGTTTGTGGCCGACCGCCTGCTGGTC-AAC--CTCGGCAACCCCAAGCACT 5436 Query 58324 ACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACT 58383 ||||| || || || ||||| |||||| | || |||||| |||||||| | |||| Sbjct 5437 ACAACTCGGCGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAGGGCAAGTCGAACT 5496 Query 58384 TTTTCGA 58390 ||||||| Sbjct 5497 TTTTCGA 5503 >seq102 Length=51898 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| |||||||| || || ||||| ||||| ||| |||| || ||| |||| Sbjct 8797 ATGCAAATTTTTGTAAAGACCCTCACTGGCAAGACGATTACCCTCGAGGTGGAATCGTCG 8856 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 8857 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAA 8916 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| || ||| |||| || ||| ||||||| || ||| Sbjct 8917 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTGAGCGACTACAAC 8976 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || ||||| || || | ||| | || |||| Sbjct 8977 ATCCAGAAGGAGAGCACGCTGCATCTCGTGCTGCGTCTGCGTGGTGGTA 9025 >seq27 Length=62815 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||||||||| ||||| ||||||||| | || || || | || Sbjct 53091 CATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACCCTTGAGGTCGAGTCTTC 53032 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || ||| ||||| ||| | || || ||||| Sbjct 53031 GGACACGATCGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCA 52972 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || |||||||| || ||| | || ||| | || ||||||| || || Sbjct 52971 ACAGCGTCTGATTTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGAGCGACTACAA 52912 Query 31372 CATTCAAAAAGA 31383 ||| || || || Sbjct 52911 CATCCAGAAGGA 52900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765123993680